RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 VSTM5A8MXK1 200 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 H7C1Q1 480 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 ARHGEF9O43307 516 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 ASNA1O43681 348 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 SMC2O95347 1197 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 BMP10O95393 424 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 PEX11BO96011 259 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 SERPINA7P05543 415 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 MMEP08473 750 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 FAM153BP0C7A2 387 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 SLC35G4P0C7Q5 338 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 MMP8P22894 467 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 PBLDP30039 288 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 PPP1R2P41236 205 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 CARSP49589 748 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 RAB28P51157 221 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 TERF1P54274 439 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 CDH6P55285 790 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 HSF1Q00613 529 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 NFE2L1Q14494 772 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 PCBP2Q15366 365 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 RNFT1Q5M7Z0 435 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 KLHL10Q6JEL2 608 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 HMBOX1Q6NT76 420 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 WDR59Q6PJI9 974 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 FAM83HQ6ZRV2 1179 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 FAM98AQ8NCA5 519 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 C3orf20Q8ND61 904 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 DENND1AQ8TEH3 1009 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 LCN9Q8WX39 176 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 PSMF1Q92530 271 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 HDAC10Q969S8 669 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 SECISBP2Q96T21 854 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 YIPF4Q9BSR8 244 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZCCHC2Q9C0B9 1178 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 PHACTR1Q9C0D0 580 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 WWP1Q9H0M0 922 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 SLC26A1Q9H2B4 701 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 PCDH9Q9HC56 1237 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 LUC7LQ9NQ29 371 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 SLC22A11Q9NSA0 550 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 TEKT2Q9UIF3 430 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 TTLL3Q9Y4R7 772 aa9.18□□□□□ -0.94
SMARCAL1-213ENST00000496037 HCFC1P51610 2035 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 CCDC88CQ9P219 2028 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 ANK3Q12955 4377 aaKnown RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 HRNRQ86YZ3 2850 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 FAM237AA0A1B0GTK4 181 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 C2orf74A8MZ97 194 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 H3BMH7 237 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZNHIT1O43257 154 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 CRLF1O75462 422 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 POP7O75817 140 aaKnown RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 F13A1P00488 732 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 IFNA2P01563 188 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 TPOP07202 933 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 PON1P27169 355 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 EEF1DP29692 281 aaKnown RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZNF143P52747 638 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 AP2B1P63010 937 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 TMPRSS15P98073 1019 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 TMEM115Q12893 351 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 KHDC1Q4VXA5 237 aaKnown RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 PPP6R3Q5H9R7 873 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 ATG9BQ674R7 924 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 PODNL1Q6PEZ8 512 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 TTLL10Q6ZVT0 673 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 NDUFAF7Q7L592 441 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 PAQR7Q86WK9 346 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 LSRQ86X29 649 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 KRTAP1-3Q8IUG1 177 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 CREBRFQ8IUR6 639 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 MARVELD2Q8N4S9 558 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 GPR26Q8NDV2 337 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 ACVR1CQ8NER5 493 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 BRSK1Q8TDC3 778 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 C8orf44Q96CB5 159 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 TUBGCP2Q9BSJ2 902 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 CNPY3Q9BT09 278 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 CLSTN2Q9H4D0 955 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZFYVE1Q9HBF4 777 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 NLRC4Q9NPP4 1024 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 HAUS2Q9NVX0 235 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 TAS2R14Q9NYV8 317 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 NFKBIL1Q9UBC1 381 aaPredicted RBP9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 CTSFQ9UBX1 484 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 TRPS1Q9UHF7 1281 aa9.17□□□□□ -0.94
SMARCAL1-213ENST00000496037 BTN3A1O00481 513 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 GPR39O43194 453 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 MT-CYBP00156 380 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 ARAFP10398 606 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 KIR2DL3P43628 341 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 ARSFP54793 590 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZNF33BQ06732 778 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 KRT72Q14CN4 511 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 Q5PR19 223 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 ARSKQ6UWY0 536 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 NEK10Q6ZWH5 1172 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms