RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	GIMAP7	Q8NHV1	300 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	KIF18A	Q8NI77	898 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	ASB11	Q8WXH4	323 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	SEC14L1	Q92503	715 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	ELMO2	Q96JJ3	720 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	SLC30A3	Q99726	388 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	LRRC1	Q9BTT6	524 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	EFHD1	Q9BUP0	239 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	ZFAT	Q9P243	1243 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	TRMT6	Q9UJA5	497 aa	Known RBP	11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	SERTAD3	Q9UJW9	196 aa		11.94	□□□□□ -0.5
MRPL55-233	ENST00000495899	MYO1C	O00159	1063 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	ZBTB14	O43829	449 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	PRICKLE3	O43900	615 aa	Predicted RBP	11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	F7	P08709	466 aa	Predicted RBP	11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	ZNF28	P17035	718 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	RGS4	P49798	205 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	FASTKD3	Q14CZ7	662 aa	Known RBP	11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	SF1	Q15637	639 aa	Known RBP	11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	GPR19	Q15760	415 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	CYP2A13	Q16696	494 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	PWWP2B	Q6NUJ5	590 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	C19orf47	Q8N9M1	422 aa	Known RBP	11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	OR9A1P	Q8NGU1	263 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	FBXO25	Q8TCJ0	367 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	ZUFSP	Q96AP4	578 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	CRELD1	Q96HD1	420 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	NDN	Q99608	321 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	FAM129A	Q9BZQ8	928 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	SAYSD1	Q9NPB0	183 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	INTS7	Q9NVH2	962 aa	Known RBP	11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	PADI1	Q9ULC6	663 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	RUVBL2	Q9Y230	463 aa	Known RBP	11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	VWA7	Q9Y334	891 aa		11.93	□□□□□ -0.5
MRPL55-233	ENST00000495899	CTAGE15	A4D2H0	777 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	ZNF839	A8K0R7	811 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	ARHGEF33	A8MVX0	844 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	TARM1	B6A8C7	271 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	SLC16A5	O15375	505 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	SCRG1	O75711	98 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	KIAA0754	O94854	1291 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CTAGE8	P0CG41	777 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	ERG	P11308	486 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	PVR	P15151	417 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	MCM3	P25205	808 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	OAS2	P29728	719 aa	Known RBP	11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	PEBP1	P30086	187 aa	Known RBP	11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	STAT5A	P42229	794 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	BDKRB1	P46663	353 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CDKN2D	P55273	166 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	RHD	Q02161	417 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CUL1	Q13616	776 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	NAA25	Q14CX7	972 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CCSMST1	Q4G0I0	132 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	GLE1	Q53GS7	698 aa	Known RBP	11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	ARHGAP40	Q5TG30	622 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	HECTD2	Q5U5R9	776 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	FAM45BP	Q6NSW5	357 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	ZDHHC24	Q6UX98	284 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CDHR3	Q6ZTQ4	885 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	C3orf62	Q6ZUJ4	267 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CTAGE6	Q86UF2	777 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	VASH2	Q86V25	355 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	TMEM126B	Q8IUX1	230 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CTAGE4	Q8IX94	777 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CPNE9	Q8IYJ1	553 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	LMNTD1	Q8N9Z9	388 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	FAM45A	Q8TCE6	357 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	DENND1A	Q8TEH3	1009 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	CDKL2	Q92772	493 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	LRFN5	Q96NI6	719 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	IL17F	Q96PD4	163 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	KLK4	Q9Y5K2	254 aa		11.92	□□□□□ -0.5
MRPL55-233	ENST00000495899	PIKFYVE	Q9Y2I7	2098 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	ZFHX4	Q86UP3	3567 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	TMEM150C	B9EJG8	249 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	RNF223	E7ERA6	249 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	CPNE3	O75131	537 aa	Known RBP	11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	TIAF1	O95411	115 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	C8G	P07360	202 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	HBQ1	P09105	142 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	LIF	P15018	202 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	FDXR	P22570	491 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	GABRA4	P48169	554 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	ITGA1	P56199	1179 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	IL2	P60568	153 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	SLC7A5	Q01650	507 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	SP140	Q13342	867 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	TRADD	Q15628	312 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	ZIC1	Q15915	447 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	CRTC2	Q53ET0	693 aa	Predicted RBP	11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	RBM20	Q5T481	1227 aa	Known RBP	11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	PAQR3	Q6TCH7	311 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	CEP128	Q6ZU80	1094 aa		11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	UBE2R2	Q712K3	238 aa	Predicted RBP	11.91	□□□□□ -0.5
MRPL55-233	ENST00000495899	STRA8	Q7Z7C7	330 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms