RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ZNF470Q6ECI4 717 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 FIGLAQ6QHK4 219 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 MCATQ8IVS2 390 aaKnown RBP23.29■■□□□ 1.32
HLA-C-209ENST00000495835 TMEM102Q8N9M5 508 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-209ENST00000495835 GABPB2Q8TAK5 448 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-209ENST00000495835 ANP32BQ92688 251 aaKnown RBP23.29■■□□□ 1.32
HLA-C-209ENST00000495835 KCNJ9Q92806 393 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 ING2Q9H160 280 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 CCDC68Q9H2F9 335 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 KCNF1Q9H3M0 494 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 CLMPQ9H6B4 373 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 ACSS2Q9NR19 701 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 FAM114A2Q9NRY5 505 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 PCYOX1Q9UHG3 505 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 GPN3Q9UHW5 284 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-209ENST00000495835 PCDHGB7Q9Y5F8 929 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 FAM169AQ9Y6X4 670 aa23.29■■□□□ 1.32
HLA-C-209ENST00000495835 PCM1Q15154 2024 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 GOLGA8MH3BSY2 632 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 SRPX2O60687 465 aaPredicted RBP23.28■■□□□ 1.32
HLA-C-209ENST00000495835 PSIP1O75475 530 aaKnown RBP23.28■■□□□ 1.32
HLA-C-209ENST00000495835 CBSLP0DN79 551 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 CBSP35520 551 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 HSD17B2P37059 387 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 GCGRP47871 477 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 SSPNQ14714 243 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 ARHGAP19Q14CB8 494 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 RNASEH2BQ5TBB1 312 aaKnown RBP23.28■■□□□ 1.32
HLA-C-209ENST00000495835 CNSTQ6PJW8 725 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 MED25Q71SY5 747 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 RAB43Q86YS6 212 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 MLXIPLQ9NP71 852 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 TRMT1Q9NXH9 659 aaKnown RBP23.28■■□□□ 1.32
HLA-C-209ENST00000495835 MAD1L1Q9Y6D9 718 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 FER1L5A0AVI2 2057 aa23.28■■□□□ 1.32
HLA-C-209ENST00000495835 UBR5O95071 2799 aaPredicted RBP23.27■■□□□ 1.32
HLA-C-209ENST00000495835 KLF7O75840 302 aaPredicted RBP23.27■■□□□ 1.32
HLA-C-209ENST00000495835 ONECUT2O95948 504 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 ERGP11308 486 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 CLCN7P51798 805 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 RRADP55042 308 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 TLE1Q04724 770 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 KCTD19Q17RG1 926 aaPredicted RBP23.27■■□□□ 1.32
HLA-C-209ENST00000495835 FCRL6Q6DN72 434 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 ASB18Q6ZVZ8 466 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 C2orf73Q8N5S3 287 aaPredicted RBP23.27■■□□□ 1.32
HLA-C-209ENST00000495835 ZNF655Q8N720 491 aaPredicted RBP23.27■■□□□ 1.32
HLA-C-209ENST00000495835 FBXO15Q8NCQ5 510 aaPredicted RBP23.27■■□□□ 1.32
HLA-C-209ENST00000495835 OR9A1PQ8NGU1 263 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 NACC2Q96BF6 587 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 ZNF285Q96NJ3 590 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 NAT9Q9BTE0 207 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 IRAK4Q9NWZ3 460 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 CIDEBQ9UHD4 219 aa23.27■■□□□ 1.32
HLA-C-209ENST00000495835 MYO18BQ8IUG5 2567 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 ZNF839A8K0R7 811 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 DNALI1O14645 258 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 TTC4O95801 387 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 IGHEP01854 428 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 CATP04040 527 aaKnown RBP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 PIM1P11309 404 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 ENO3P13929 434 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 GRIA3P42263 894 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 BDKRB1P46663 353 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 PTK6Q13882 451 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 KLHL38Q2WGJ6 581 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 CCSMST1Q4G0I0 132 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 NKAIN1Q4KMZ8 207 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 PAPD7Q5XG87 772 aaKnown RBP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 HPS6Q86YV9 775 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 TEX19Q8NA77 164 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 OR2A1Q8NGT9 310 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 RUNDC3BQ96NL0 473 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 TRIM56Q9BRZ2 755 aaKnown RBP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 FAM167BQ9BTA0 163 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 TRIM55Q9BYV6 548 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 C20orf96Q9NUD7 363 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 IL1RAPL1Q9NZN1 696 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 IFT80Q9P2H3 777 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-209ENST00000495835 NDOR1Q9UHB4 597 aa23.26■■□□□ 1.31
HLA-C-209ENST00000495835 ARGFXA6NJG6 315 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 MYO1CO00159 1063 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 EIF3FO00303 357 aaPredicted RBP23.25■■□□□ 1.31
HLA-C-209ENST00000495835 ZNF185O15231 689 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 CEACAM4O75871 244 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 MPC1LP0DKB6 136 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 PGAM1P18669 254 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 PTGIRP43119 386 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 CTBP1Q13363 440 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 GRM7Q14831 915 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 FAM214AQ32MH5 1076 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 ACSBG2Q5FVE4 666 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 MLIPQ5VWP3 458 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 MRPL14Q6P1L8 145 aaKnown RBP23.25■■□□□ 1.31
HLA-C-209ENST00000495835 SYDE1Q6ZW31 735 aaPredicted RBP23.25■■□□□ 1.31
HLA-C-209ENST00000495835 TAX1BP1Q86VP1 789 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 DENND6AQ8IWF6 608 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 FAM20CQ8IXL6 584 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 AGGF1Q8N302 714 aaeCLIP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms