RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 EMBQ6PCB8 327 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 CNPY4Q8N129 248 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 MDM1Q8TC05 714 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 ZNF480Q8WV37 535 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 DCAKDQ8WVC6 231 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 DLG3Q92796 817 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 PRR11Q96HE9 360 aaPredicted RBP12.04□□□□□ -0.48
TRA2A-209ENST00000494255 ZNF578Q96N58 590 aaPredicted RBP12.04□□□□□ -0.48
TRA2A-209ENST00000494255 TRAPPC9Q96Q05 1148 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 TMEM121BQ9BXQ6 578 aaPredicted RBP12.04□□□□□ -0.48
TRA2A-209ENST00000494255 PARD6BQ9BYG5 372 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 TWSG1Q9GZX9 223 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 PDE7BQ9NP56 450 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 FBXO8Q9NRD0 319 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 SNX15Q9NRS6 342 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 INTS7Q9NVH2 962 aaKnown RBP12.04□□□□□ -0.48
TRA2A-209ENST00000494255 ARL15Q9NXU5 204 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 DKK4Q9UBT3 224 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 BTRCQ9Y297 605 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 ACOT9Q9Y305 439 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 PCDHB11Q9Y5F2 797 aa12.04□□□□□ -0.48
TRA2A-209ENST00000494255 CDC7O00311 574 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 POLR1CO15160 346 aaPredicted RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 NVLO15381 856 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 CCNDBP1O95273 360 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 WISP3O95389 354 aaPredicted RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SNRPAP09012 282 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SLC35E2BP0CK96 405 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 PVRP15151 417 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ST6GAL1P15907 406 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SLC26A3P40879 764 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ACY1Q03154 408 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 FASTKQ14296 549 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 NAA25Q14CX7 972 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 TBC1D25Q3MII6 688 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 THEMIS2Q5TEJ8 643 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 CEACAM20Q6UY09 585 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 D2HGDHQ8N465 521 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SPATA6LQ8N4H0 392 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 BMPERQ8N8U9 685 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 C19orf47Q8N9M1 422 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 FLVCR1-AS1Q8TAF5 88 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ATL1Q8WXF7 558 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 USP7Q93009 1102 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 UBXN10Q96LJ8 280 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 TEFMQ96QE5 360 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 OR6C1Q96RD1 312 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 DDA1Q9BW61 102 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ASPSCR1Q9BZE9 553 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 UNKQ9C0B0 810 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 B3GNT4Q9C0J1 378 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 KLHL25Q9H0H3 589 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 EPB41L4BQ9H329 900 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 FANCEQ9HB96 536 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 NMRAL1Q9HBL8 299 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ASCL3Q9NQ33 180 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SIDT1Q9NXL6 827 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 STOX2Q9P2F5 926 aaPredicted RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 FETUBQ9UGM5 382 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 PCDHGA7Q9Y5G6 932 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 HMX2A2RU54 273 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 CDRT15L2A8MXV6 281 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 TRIM49D1C9J1S8 452 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 PRICKLE3O43900 615 aaPredicted RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 GUCA1CO95843 209 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 C2P06681 752 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 LTA4HP09960 611 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 EBLN1P0CF75 366 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 PSMB5P28074 263 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 IMPA1P29218 277 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 CMPK1P30085 196 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SLC5A2P31639 672 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SH3BP2P78314 561 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 TUBB3Q13509 450 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 KCNAB1Q14722 419 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 TSNQ15631 228 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 AGTRAPQ6RW13 159 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SUSD1Q6UWL2 747 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 SBSNQ6UWP8 590 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 MBOAT1Q6ZNC8 495 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 CLEC14AQ86T13 490 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 PPFIBP2Q8ND30 876 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 AENQ8WTP8 325 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ZCCHC14Q8WYQ9 949 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 N4BP2L2Q92802 583 aaPredicted RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 TCTN2Q96GX1 697 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 MIPEPQ99797 713 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 EGFL8Q99944 293 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ZPBPQ9BS86 351 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 DHRS4Q9BTZ2 278 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ACAT2Q9BWD1 397 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 VPS11Q9H270 941 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 PPCSQ9HAB8 311 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 CCDC177Q9NQR7 707 aaPredicted RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ABCF3Q9NUQ8 709 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 UTP6Q9NYH9 597 aaKnown RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 PSMC3IPQ9P2W1 217 aaPredicted RBP12.03□□□□□ -0.48
TRA2A-209ENST00000494255 IKZF3Q9UKT9 509 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 OARD1Q9Y530 152 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms