RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 UHRF1Q96T88 793 aaPredicted RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 ZNF304Q9HCX3 659 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 INTS7Q9NVH2 962 aaKnown RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 A0A0J9YVX5 310 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 ANKRD28O15084 1053 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 MTRF1O75570 445 aaKnown RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 SRPRAP08240 638 aaKnown RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 FASP25445 335 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 GGT5P36269 586 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 CD97P48960 835 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 GSK3BP49841 420 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 CCT8P50990 548 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 HENMT1Q5T8I9 393 aaKnown RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 TTC23LQ6PF05 361 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 C12orf40Q86WS4 652 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 KIAA2013Q8IYS2 634 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 ADGRG5Q8IZF4 528 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 TRAM1L1Q8N609 369 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 MAGEE2Q8TD90 523 aaPredicted RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 RIOK2Q9BVS4 552 aaKnown RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 TRIM15Q9C019 465 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 ZNF490Q9ULM2 529 aaPredicted RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 ALPK3Q96L96 1907 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 MANBAO00462 879 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 KPNA5O15131 536 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 HIST1H2AGP0C0S8 130 aaPredicted RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 BMP2P12643 396 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 EPORP19235 508 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 HIST1H2ADP20671 130 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 ALDH3B2P48448 385 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 HMGCS1Q01581 520 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 AAK1Q2M2I8 961 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 SGO1Q5FBB7 561 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 OTUD3Q5T2D3 398 aaPredicted RBP13.42□□□□□ -0.26
VCP-207ENST00000493886 DPPA4Q7L190 304 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 TRIM46Q7Z4K8 759 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 TCAIMQ8N3R3 496 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 OSCP1Q8WVF1 389 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 RSPRY1Q96DX4 576 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 LRIG1Q96JA1 1093 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 VPS50Q96JG6 964 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 HIST1H2AHQ96KK5 128 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 HIST1H2AJQ99878 128 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 H2AFJQ9BTM1 129 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 ALG2Q9H553 416 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 AGPAT4Q9NRZ5 378 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 RAD18Q9NS91 495 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 ACTR3BQ9P1U1 418 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 THEGQ9P2T0 379 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 DPP7Q9UHL4 492 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 PLXNA2O75051 1894 aa13.42□□□□□ -0.26
VCP-207ENST00000493886 AQP12BA6NM10 295 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 C16orf96A6NNT2 1141 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 FADS2P1A8MWK0 482 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 SGTAO43765 313 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 RSL1D1O76021 490 aaKnown RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 CLDN9O95484 217 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 NPPAP01160 153 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 RB1P06400 928 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 MERTKQ12866 999 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 ZXDCQ2QGD7 858 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 ZIK1Q3SY52 487 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 PYCR3Q53H96 274 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 IRAK1BP1Q5VVH5 260 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 LCN8Q6JVE9 175 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 LRRC70Q7Z2Q7 622 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 GPR141Q7Z602 305 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 RALGPS2Q86X27 583 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 AQP12AQ8IXF9 295 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 DPP10Q8N608 796 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 DDHD1Q8NEL9 900 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 WFIKKN2Q8TEU8 576 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 SMG7Q92540 1137 aaKnown RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 ELMO1Q92556 727 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 PMM1Q92871 262 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 USP7Q93009 1102 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 KCTD14Q9BQ13 255 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 ZSCAN5AQ9BUG6 496 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 SLC29A3Q9BZD2 475 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 ACTR8Q9H981 624 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 ARMC1Q9NVT9 282 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 NFKBIL1Q9UBC1 381 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 ZNHIT2Q9UHR6 403 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 PADI4Q9UM07 663 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 EIF3LQ9Y262 564 aaKnown RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 PABPN1LA6NDY0 278 aaKnown RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 GRXCR2A6NFK2 248 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 GFYI3L273 518 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 AP2A2O94973 939 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 POU2F2P09086 479 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 PCNAP12004 261 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 EN2P19622 333 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 JAK1P23458 1154 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 VIPR2P41587 438 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 CDK9P50750 372 aaKnown RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 LIPEQ05469 1076 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 MAD2L1Q13257 205 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 SP140Q13342 867 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms