RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 TXLNGYQ9BZA5 131 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 PPP1R3CQ9UQK1 317 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 FEZF1A0PJY2 475 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 A8MV72 311 aaPredicted RBP3.45□□□□□ -1.86
SMC4-223ENST00000493695 UBE2CO00762 179 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 KLF11O14901 512 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 IGHV3-13P01766 116 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 HUNKP57058 714 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 GSDMDP57764 484 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 NR1D2Q14995 579 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 CBWD6Q4V339 395 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 BMP2KLQ5H9B9 411 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 CBWD3Q5JTY5 395 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 GRTP1Q5TC63 336 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 ADALQ6DHV7 355 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 GPR139Q6DWJ6 353 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 RPUSD3Q6P087 351 aaKnown RBP3.45□□□□□ -1.86
SMC4-223ENST00000493695 TEX38Q6PEX7 206 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 LINGO4Q6UY18 593 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 Q6ZR54 194 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 AVL9Q8NBF6 648 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 ZNF519Q8TB69 540 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 LPGAT1Q92604 370 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 DAZLQ92904 295 aaKnown RBP3.45□□□□□ -1.86
SMC4-223ENST00000493695 C16orf70Q9BSU1 422 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 SLA2Q9H6Q3 261 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 PANK4Q9NVE7 773 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 TAS2R14Q9NYV8 317 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 NME7Q9Y5B8 376 aa3.45□□□□□ -1.86
SMC4-223ENST00000493695 MAGED1Q9Y5V3 778 aaPredicted RBP3.45□□□□□ -1.86
SMC4-223ENST00000493695 A0A1W2PRB8 838 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 IDH3BO43837 385 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 SSX4O60224 188 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 OR10H2O60403 315 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 PRAMEF11O60813 436 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 DNTTP04053 509 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 HSP90AA1P07900 732 aaKnown RBP3.44□□□□□ -1.86
SMC4-223ENST00000493695 DANCRP0C864 163 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 VPREB1P12018 145 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 ITIH1P19827 911 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 CDK3Q00526 305 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 KYNUQ16719 465 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 IGSF11Q5DX21 431 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 SLC30A6Q6NXT4 461 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 DCLK2Q8N568 766 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 OR6C1Q96RD1 312 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 PUS3Q9BZE2 481 aaKnown RBP3.44□□□□□ -1.86
SMC4-223ENST00000493695 KLHL4Q9C0H6 718 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 GPR88Q9GZN0 384 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 ACKR4Q9NPB9 350 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 SLC35C2Q9NQQ7 365 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 IL17BQ9UHF5 180 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 TUBE1Q9UJT0 475 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 ANGPTL3Q9Y5C1 460 aa3.44□□□□□ -1.86
SMC4-223ENST00000493695 hCG_1809904A0A1W2PP81 198 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 A0A1W2PPE2 198 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 A0A1W2PR64 198 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 MEX3AA1L020 520 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 TMEM221A6NGB7 291 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 SOCS3O14543 225 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 MED24O75448 989 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 PIGNO95427 931 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 RBMS1P29558 406 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 OPRL1P41146 370 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 LMAN1P49257 510 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 LIG4P49917 911 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 SNRPEP62304 92 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 CALD1Q05682 793 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 SNTB1Q13884 538 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 IL11RAQ14626 422 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 FASTKD3Q14CZ7 662 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 CRY2Q49AN0 593 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 GCNT6Q5T4J0 391 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 ERMARDQ5T6L9 678 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 MFSD4BQ5TF39 518 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 FIP1L1Q6UN15 594 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 FAM198BQ6UWH4 519 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 PIGZQ86VD9 579 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 ZNF595Q8IYB9 648 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 POMGNT2Q8NAT1 580 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 TDRD5Q8NAT2 981 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 POGLUT1Q8NBL1 392 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 APPL2Q8NEU8 664 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 MOSPD2Q8NHP6 518 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 CFAP61Q8NHU2 1237 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 HSD17B8Q92506 261 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 GTF3AQ92664 365 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 CENPTQ96BT3 561 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 PGAP3Q96FM1 320 aaPredicted RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 ZNF582Q96NG8 517 aaPredicted RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 APOL6Q9BWW8 343 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 HHATLQ9HCP6 504 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 CHMP1AQ9HD42 196 aaPredicted RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 OLAHQ9NV23 265 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 CPSF2Q9P2I0 782 aaKnown RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 RHCGQ9UBD6 479 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 CELA1Q9UNI1 258 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 TRPV2Q9Y5S1 764 aa3.43□□□□□ -1.86
SMC4-223ENST00000493695 SPIN1Q9Y657 262 aaPredicted RBP3.43□□□□□ -1.86
SMC4-223ENST00000493695 SOS1Q07889 1333 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms