RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TNFSF10P50591 281 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 BRD3Q15059 726 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 FAM214AQ32MH5 1076 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 DNAJC21Q5F1R6 531 aaKnown RBP16.91■□□□□ 0.3
NUP50-218ENST00000493456 VWA2Q5GFL6 755 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 TMEM207Q6UWW9 146 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 CDKL3Q8IVW4 592 aaPredicted RBP16.91■□□□□ 0.3
NUP50-218ENST00000493456 FAM20CQ8IXL6 584 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 KBTBD2Q8IY47 623 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 PIANPQ8IYJ0 282 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 CCDC110Q8TBZ0 833 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.91■□□□□ 0.3
NUP50-218ENST00000493456 CCDC42Q96M95 316 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 ZNF285Q96NJ3 590 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 TAAR6Q96RI8 345 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 ZNF160Q9HCG1 818 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 SPTLC3Q9NUV7 552 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 IFNKQ9P0W0 207 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 SNRNP200O75643 2136 aaKnown RBP16.91■□□□□ 0.3
NUP50-218ENST00000493456 FITM1A5D6W6 292 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 FKBP9O95302 570 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 S1PR4O95977 384 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 RPN2P04844 631 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 PRSS56P0CW18 603 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 SOX11P35716 441 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 CCDC181Q5TID7 509 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 LINC01555Q8NAE3 123 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 STYXQ8WUJ0 223 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 HAS2Q92819 552 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 CDKN2AIPNLQ96HQ2 116 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 SPATA13Q96N96 652 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 SELENOSQ9BQE4 189 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 TRIM8Q9BZR9 551 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 C10orf88Q9H8K7 445 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
NUP50-218ENST00000493456 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.9■□□□□ 0.3
NUP50-218ENST00000493456 ABI3Q9P2A4 366 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 KLHL20Q9Y2M5 609 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.9■□□□□ 0.3
NUP50-218ENST00000493456 ALG6Q9Y672 507 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 PRSS21Q9Y6M0 314 aa16.9■□□□□ 0.3
NUP50-218ENST00000493456 F8W8V4 182 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 CCL21O00585 134 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 CRYABP02511 175 aaKnown RBP16.89■□□□□ 0.29
NUP50-218ENST00000493456 OR56A5P0C7T3 313 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 MCM3P25205 808 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 CA7P43166 264 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 OR1D4P47884 311 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 HADHBP55084 474 aaKnown RBP16.89■□□□□ 0.29
NUP50-218ENST00000493456 OCA2Q04671 838 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 RBPJQ06330 500 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 KLC1Q07866 573 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
NUP50-218ENST00000493456 FIGLAQ6QHK4 219 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 KLHDC8BQ8IXV7 354 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 DNAJB8Q8NHS0 232 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 STT3BQ8TCJ2 826 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 MIEF2Q96C03 454 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 MENTQ9BUN1 341 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 HEMGNQ9BXL5 484 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 PTGFRNQ9P2B2 879 aa16.89■□□□□ 0.29
NUP50-218ENST00000493456 ZNF282Q9UDV7 671 aaPredicted RBP16.89■□□□□ 0.29
NUP50-218ENST00000493456 MRPS2Q9Y399 296 aaKnown RBP16.89■□□□□ 0.29
NUP50-218ENST00000493456 NSG1A0A0A6YYJ2 146 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 KCNN4O15554 427 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 SRPX2O60687 465 aaPredicted RBP16.88■□□□□ 0.29
NUP50-218ENST00000493456 ZNF189O75820 626 aaPredicted RBP16.88■□□□□ 0.29
NUP50-218ENST00000493456 UNC5CO95185 931 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 ZGLP1P0C6A0 271 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 PRR35P0CG20 571 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 CD9P21926 228 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 COPS2P61201 443 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 ATG9BQ674R7 924 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 PRMT9Q6P2P2 845 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 XKRXQ6PP77 449 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 NDUFAF7Q7L592 441 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 DCUN1D3Q8IWE4 304 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 METTL27Q8N6F8 245 aaPredicted RBP16.88■□□□□ 0.29
NUP50-218ENST00000493456 ACTL9Q8TC94 416 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 BRIX1Q8TDN6 353 aaKnown RBP16.88■□□□□ 0.29
NUP50-218ENST00000493456 ALS2CR12Q96Q35 445 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 ZNF304Q9HCX3 659 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 SEC14L3Q9UDX4 400 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 C3orf18Q9UK00 162 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 MAU2Q9Y6X3 613 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 FAM169AQ9Y6X4 670 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 MYO7BQ6PIF6 2116 aa16.88■□□□□ 0.29
NUP50-218ENST00000493456 PKDREJQ9NTG1 2253 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 A0A1W2PQ72 361 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 MACROD2A1Z1Q3 448 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 TARM1B6A8C7 271 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 SERPINA7P05543 415 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 SNRPB2P08579 225 aaKnown RBP16.87■□□□□ 0.29
NUP50-218ENST00000493456 AGAP20933 346 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 MSNP26038 577 aaKnown RBP16.87■□□□□ 0.29
NUP50-218ENST00000493456 SSTR2P30874 369 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 GRIA3P42263 894 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 CASP6P55212 293 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 SPARCL1Q14515 664 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms