RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 EIF2S3P41091 472 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 TNFSF9P41273 254 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 OR1G1P47890 313 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 QARSP47897 775 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 HOXA1P49639 335 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 EEF1A1P68104 462 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 POSTNQ15063 836 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ANKRD1Q15327 319 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 PTPN14Q15678 1187 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 SLC1A5Q15758 541 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF876PQ49A33 203 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 SERTAD4-AS1Q5TG53 156 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 EEF1A1P5Q5VTE0 462 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 SLC35E4Q6ICL7 350 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 LRRC8EQ6NSJ5 796 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ANKRD54Q6NXT1 300 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 CD300LGQ6UXG3 332 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 CEACAM20Q6UY09 585 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 NOXA1Q86UR1 476 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 MOGAT3Q86VF5 341 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 CATSPER3Q86XQ3 398 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 SMAP1Q8IYB5 467 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 C1orf87Q8N0U7 546 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 LRRC43Q8N309 656 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF713Q8N859 430 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 C4orf32Q8N8J7 132 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF248Q8NDW4 579 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 BEST2Q8NFU1 509 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 DUSP19Q8WTR2 217 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 APBB2Q92870 758 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 C18orf25Q96B23 403 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 PABPC5Q96DU9 382 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 CDHR1Q96JP9 859 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 C8orf76Q96K31 380 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ZMAT2Q96NC0 199 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF558Q96NG5 402 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 MTMR9Q96QG7 549 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 RPP25Q9BUL9 199 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 NUF2Q9BZD4 464 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ZBP1Q9H171 429 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 PDZD7Q9H5P4 517 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 DHX33Q9H6R0 707 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ESRP2Q9H6T0 727 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 TLE6Q9H808 572 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 MKKSQ9NPJ1 570 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 TBC1D22BQ9NU19 505 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 AGPAT5Q9NUQ2 364 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 DDX19AQ9NUU7 478 aaKnown RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 TMEM161AQ9NX61 479 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 IL1RAPL1Q9NZN1 696 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 TBC1D7Q9P0N9 293 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 TUBGCP4Q9UGJ1 667 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 FAF1Q9UNN5 650 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 STON1Q9Y6Q2 735 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 WDFY4Q6ZS81 3184 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 CACNA1HO95180 2353 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 USP34Q70CQ2 3546 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 ASCC3Q8N3C0 2202 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 LRP4O75096 1905 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PTPRJQ12913 1337 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 CCDC196A0A1B0GTZ2 297 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 FAM170AA1A519 330 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 VWA3AA6NCI4 1184 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ARL5CA6NH57 179 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 B9A039 149 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ANKRD63C9JTQ0 380 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 C5orf67F2Z3F1 127 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 SLC16A4O15374 487 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 CCL16O15467 120 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PI15O43692 258 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PCDH7O60245 1069 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 GALTP07902 379 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 CNPP09543 421 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 OR52Z1P0C646 297 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 DDX5P17844 614 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 AGAP20933 346 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 MARCKSP29966 332 aaPredicted RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ARL2P36404 184 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 DRG2P55039 364 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ARPP19P56211 112 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PEX3P56589 373 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PSMC5P62195 406 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PDE1BQ01064 536 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 KCNC3Q14003 757 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 VEPH1Q14D04 833 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 KARSQ15046 597 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 BRD3Q15059 726 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 TAF11Q15544 211 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 NAB2Q15742 525 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ZC2HC1CQ53FD0 456 aaPredicted RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 XKR3Q5GH77 459 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 STXBP5Q5T5C0 1151 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ARHGAP17Q68EM7 881 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 SLC39A4Q6P5W5 647 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 SLC27A1Q6PCB7 646 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 SLC24A5Q71RS6 500 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 GET4Q7L5D6 327 aaPredicted RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 LINGO2Q7L985 606 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 GPAT4Q86UL3 456 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms