RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 FAM136AQ96C01 138 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 KIFC1Q9BW19 673 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 GPR83Q9NYM4 423 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 ANKMY1Q9P2S6 941 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 MASP2O00187 686 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 AP3B1O00203 1094 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 KPNA5O15131 536 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 DPM1O60762 260 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 NIPSNAP2O75323 286 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 AVILO75366 819 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 C1orf105O95561 183 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 MCM3P25205 808 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 PSMB5P28074 263 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 UQCRFS1P47985 274 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 SSPNQ14714 243 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 MRNIPQ6NTE8 343 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 MRPL14Q6P1L8 145 aaKnown RBP16.57■□□□□ 0.24
SGMS1-204ENST00000492601 TTLL10Q6ZVT0 673 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 SDCCAG8Q86SQ7 713 aaPredicted RBP16.57■□□□□ 0.24
SGMS1-204ENST00000492601 PRELID2Q8N945 189 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 OR2Y1Q8NGV0 311 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 DLG3Q92796 817 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 RAD51AP1Q96B01 352 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 BIRC8Q96P09 236 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 MRM3Q9HC36 420 aaKnown RBP16.57■□□□□ 0.24
SGMS1-204ENST00000492601 INTS7Q9NVH2 962 aaKnown RBP16.57■□□□□ 0.24
SGMS1-204ENST00000492601 SOX13Q9UN79 622 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 PCDHGB7Q9Y5F8 929 aa16.57■□□□□ 0.24
SGMS1-204ENST00000492601 SVILO95425 2214 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 CLEC18AA5D8T8 446 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 PEX12O00623 359 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 VPS4BO75351 444 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 SORBS2O94875 1100 aaKnown RBP16.56■□□□□ 0.24
SGMS1-204ENST00000492601 ITGAXP20702 1163 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 CCZ1BP86790 482 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 CCZ1P86791 482 aaPredicted RBP16.56■□□□□ 0.24
SGMS1-204ENST00000492601 CDK16Q00536 496 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 GPS1Q13098 491 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 KCNJ11Q14654 390 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 ANKRD22Q5VYY1 191 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 JMJD6Q6NYC1 403 aaPredicted RBP16.56■□□□□ 0.24
SGMS1-204ENST00000492601 CASC4Q6P4E1 433 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 CLEC18BQ6UXF7 455 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 FAM26EQ8N5C1 309 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 CLEC18CQ8NCF0 446 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 LPGAT1Q92604 370 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 PTERQ96BW5 349 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 FOPNLQ96NB1 174 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 IP6K3Q96PC2 410 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 MIPEPQ99797 713 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 TRIM56Q9BRZ2 755 aaKnown RBP16.56■□□□□ 0.24
SGMS1-204ENST00000492601 RAB11FIP5Q9BXF6 653 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 SLC22A11Q9NSA0 550 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 HOMER3Q9NSC5 361 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 P4HTMQ9NXG6 502 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 IL1RAPL1Q9NZN1 696 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 VPS4AQ9UN37 437 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 CRYL1Q9Y2S2 319 aa16.56■□□□□ 0.24
SGMS1-204ENST00000492601 PRICKLE3O43900 615 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-204ENST00000492601 KRT14P02533 472 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 UMODP07911 640 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 CD63P08962 238 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 GNLYP22749 145 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 GCGRP47871 477 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 ARSFP54793 590 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 PRR30Q53SZ7 412 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-204ENST00000492601 ZC3H12BQ5HYM0 836 aaKnown RBP16.55■□□□□ 0.24
SGMS1-204ENST00000492601 TTC27Q6P3X3 843 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 PPP1R32Q7Z5V6 425 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 RAB42Q8N4Z0 105 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 METTL27Q8N6F8 245 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-204ENST00000492601 RBMXL3Q8N7X1 1067 aaKnown RBP16.55■□□□□ 0.24
SGMS1-204ENST00000492601 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-204ENST00000492601 COL26A1Q96A83 441 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 FER1L6-AS2Q96M78 137 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 SMAD5Q99717 465 aaKnown RBP16.55■□□□□ 0.24
SGMS1-204ENST00000492601 SELENOSQ9BQE4 189 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 SLAMF7Q9NQ25 335 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 GALPQ9UBC7 116 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 PPP2R2CQ9Y2T4 447 aa16.55■□□□□ 0.24
SGMS1-204ENST00000492601 NBPF19A0A087WUL8 3843 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 A0A1B0GX78 115 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 PFDN6O15212 129 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 NRP2O60462 931 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 CTSVO60911 334 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 F7P08709 466 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-204ENST00000492601 CHRM3P20309 590 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 CCNFP41002 786 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 VSX2P58304 361 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-204ENST00000492601 SARNPP82979 210 aaKnown RBP16.54■□□□□ 0.24
SGMS1-204ENST00000492601 INPP5JQ15735 1006 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-204ENST00000492601 TYSND1Q2T9J0 566 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 DCAF10Q5QP82 559 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 RNF187Q5TA31 235 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-204ENST00000492601 SLC6A19Q695T7 634 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 KIAA0930Q6ICG6 404 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-204ENST00000492601 GALNT16Q8N428 558 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 DTWD1Q8N5C7 304 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 Q8NA96 180 aa16.54■□□□□ 0.24
SGMS1-204ENST00000492601 CLEC1AQ8NC01 280 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms