RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RNFT1Q5M7Z0 435 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 ZDHHC20Q5W0Z9 365 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 FCRLBQ6BAA4 426 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 CCDC70Q6NSX1 233 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 NAPRTQ6XQN6 538 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 CD163Q86VB7 1156 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 CDC20BQ86Y33 519 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 KRTAP1-3Q8IUG1 177 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 CLYBLQ8N0X4 340 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 BEST3Q8N1M1 668 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 RPRMLQ8N4K4 120 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 OR5AR1Q8NGP9 310 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 ZNF398Q8TD17 642 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 TFGQ92734 400 aaPredicted RBP13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 SRPK1Q96SB4 655 aaKnown RBP13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 COG4Q9H9E3 785 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 ZNF304Q9HCX3 659 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 UBP1Q9NZI7 540 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 ZNF282Q9UDV7 671 aaPredicted RBP13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 EDARQ9UNE0 448 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 A0A1W2PQ72 361 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 A8MUI8 341 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 FAM171A2A8MVW0 826 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 ISM1B1AKI9 464 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 IDSB3KWA1 339 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 INAFM1C9JVW0 142 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 TPOP07202 933 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 SHMT2P34897 504 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 PTGER1P34995 402 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 GRIA3P42263 894 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 PRLHRP49683 370 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 EMP2P54851 167 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 DLX5P56178 289 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 IFI35P80217 286 aaPredicted RBP13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 TUBA3CQ13748 450 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 DPYSL3Q14195 570 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 GRM7Q14831 915 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 TUBA3EQ6PEY2 450 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 KDELC1Q6UW63 502 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 CHSY3Q70JA7 882 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 GOT1L1Q8NHS2 421 aaPredicted RBP13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 FAM57AQ8TBR7 257 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 FAM71BQ8TC56 605 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 RND1Q92730 232 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 SCMH1Q96GD3 660 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 IL1RAPL1Q9NZN1 696 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 MYO1AQ9UBC5 1043 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 PLAGL1Q9UM63 463 aa13.01□□□□□ -0.33
EXOSC3-207ENST00000490516 FFAR3O14843 346 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 GPR42O15529 346 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 MX2P20592 715 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 CD96P40200 585 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 CD151P48509 253 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 OR1C1Q15619 314 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 ZNF658BQ4V348 819 aaPredicted RBP13□□□□□ -0.33
EXOSC3-207ENST00000490516 YOD1Q5VVQ6 348 aaPredicted RBP13□□□□□ -0.33
EXOSC3-207ENST00000490516 TMEM211Q6ICI0 200 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 SPINK14Q6IE38 97 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 PAMR1Q6UXH9 720 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 GLT6D1Q7Z4J2 308 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 GALNTL5Q7Z4T8 443 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 TTC29Q8NA56 475 aaPredicted RBP13□□□□□ -0.33
EXOSC3-207ENST00000490516 MLKLQ8NB16 471 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 SEC16BQ96JE7 1060 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 SYT11Q9BT88 431 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 SLC25A51Q9H1U9 297 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 TRABDQ9H4I3 376 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 STOX2Q9P2F5 926 aaPredicted RBP13□□□□□ -0.33
EXOSC3-207ENST00000490516 TEKT2Q9UIF3 430 aa13□□□□□ -0.33
EXOSC3-207ENST00000490516 TDRKHQ9Y2W6 561 aaKnown RBP13□□□□□ -0.33
EXOSC3-207ENST00000490516 HIVEP2P31629 2446 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 A0A1B0GTH9 108 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 ATE1O95260 518 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 RAF1P04049 648 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 PTGS2P35354 604 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 CHRNA4P43681 627 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 PPIDQ08752 370 aaKnown RBP12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 FASTKQ14296 549 aaKnown RBP12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 ACER2Q5QJU3 275 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 PHC2Q8IXK0 858 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 SLC25A41Q8N5S1 370 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 CPSF7Q8N684 471 aaKnown RBP12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 PQLC3Q8N755 202 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 LMNTD1Q8N9Z9 388 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 BLOC1S5Q8TDH9 187 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 BTBD6Q96KE9 485 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 IMMP1LQ96LU5 166 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 ZNF700Q9H0M5 742 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 GNPTGQ9UJJ9 305 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 PKP3Q9Y446 797 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 SCINQ9Y6U3 715 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 ZANQ9Y493 2812 aa12.99□□□□□ -0.33
EXOSC3-207ENST00000490516 IGLV3-12A0A075B6K2 115 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 FITM1A5D6W6 292 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 CD46P15529 392 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 ZNF24P17028 368 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms