RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ROR1Q01973 937 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 PPARDQ03181 441 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 ALCAMQ13740 583 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 HNF4GQ14541 408 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 EFNB3Q15768 340 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 ZNF628Q5EBL2 1059 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 TCP11X2Q5H9J9 407 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 FNBP1LQ5T0N5 605 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 C1QTNF12Q5T7M4 302 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 MORN5Q5VZ52 161 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 CCNI2Q6ZMN8 369 aaPredicted RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 COLCA1Q6ZS62 124 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 GALNTL5Q7Z4T8 443 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 DNAJB7Q7Z6W7 309 aaPredicted RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 SLFN11Q7Z7L1 901 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 PIP4P1Q86T03 277 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 TLK2Q86UE8 772 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 SRRM1Q8IYB3 904 aaKnown RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 AADATQ8N5Z0 425 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 CSNK2A3Q8NEV1 391 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 DENND1AQ8TEH3 1009 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 TRPC4APQ8TEL6 797 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 PIGOQ8TEQ8 1089 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 PTPMT1Q8WUK0 201 aaPredicted RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 TEKT4Q8WW24 435 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 MRPS27Q92552 414 aaKnown RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 LPGAT1Q92604 370 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 ATP6V1E2Q96A05 226 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 TXNDC15Q96J42 360 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 OPA3Q9H6K4 179 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 MMP25Q9NPA2 562 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 DNAJB4Q9UDY4 337 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 AMACRQ9UHK6 382 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 DBNLQ9UJU6 430 aaKnown RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 ANAPC5Q9UJX4 755 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 WDR81Q562E7 1941 aa4.76□□□□□ -1.65
SSX2IP-208ENST00000490476 AKAP9Q99996 3911 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 COL6A5A8TX70 2615 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 hDV102S1A0JD36 115 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 CLEC18AA5D8T8 446 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 A8MXE2 369 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 IPO8O15397 1037 aaKnown RBP4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 ASAP2O43150 1006 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 ASNSP08243 561 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 MC5RP33032 325 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 RAD23AP54725 363 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 FOXM1Q08050 763 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 MAD2L1Q13257 205 aaPredicted RBP4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 KLF9Q13886 244 aaPredicted RBP4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 COG2Q14746 738 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 SNAPC1Q16533 368 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 KRBOX4Q5JUW0 171 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 DNTTIP2Q5QJE6 756 aaKnown RBP4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 DCST1Q5T197 706 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 NSUN5P2Q63ZY6 315 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 TMEM211Q6ICI0 200 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 KCTD18Q6PI47 426 aaPredicted RBP4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 CLEC18BQ6UXF7 455 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 GALNT13Q8IUC8 556 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 CEP97Q8IW35 865 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 MCEMP1Q8IX19 187 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 RASGEF1CQ8N431 466 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 GUF1Q8N442 669 aaKnown RBP4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 FBXO39Q8N4B4 442 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 CLEC18CQ8NCF0 446 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 OIT3Q8WWZ8 545 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 TOP1MTQ969P6 601 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 SIPA1Q96FS4 1042 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 URB1-AS1Q96HZ7 61 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 C12orf42Q96LP6 360 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 LRFN5Q96NI6 719 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 MYADMQ96S97 322 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 SH3GL2Q99962 352 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 ERVMER34-1Q9H9K5 563 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 PLAC1Q9HBJ0 212 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 CHMP1AQ9HD42 196 aaPredicted RBP4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 ZBTB40Q9NUA8 1239 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 POT1Q9NUX5 634 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 ANAPC2Q9UJX6 822 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 B3GALT5Q9Y2C3 310 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 NAV1Q8NEY1 1877 aa4.75□□□□□ -1.65
SSX2IP-208ENST00000490476 WDR91A4D1P6 747 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 MAP2K7O14733 419 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 SPINT2O43291 252 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 GH2P01242 217 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 LCATP04180 440 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 RPN1P04843 607 aaKnown RBP4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 VPREB1P12018 145 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 DDX5P17844 614 aaKnown RBP4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 TNFRSF1BP20333 461 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 CD38P28907 300 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 GYG1P46976 350 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 ARSEP51690 589 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 NUDT6P53370 316 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 CSE1LP55060 971 aaKnown RBP4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 CDH13P55290 713 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 ETFDHQ16134 617 aa4.74□□□□□ -1.65
SSX2IP-208ENST00000490476 CTF1Q16619 201 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms