RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 KRT222Q8N1A0 295 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 PPM1KQ8N3J5 372 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 MSANTD4Q8NCY6 345 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 UBA3Q8TBC4 463 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 PARD3BQ8TEW8 1205 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 TMEM171Q8WVE6 324 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 FKBP10Q96AY3 582 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 DTD2Q96FN9 168 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 PBKQ96KB5 322 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 OSBPL9Q96SU4 736 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 AGPAT1Q99943 283 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 PARD6BQ9BYG5 372 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 IMPG2Q9BZV3 1241 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 PNPLA3Q9NST1 481 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 RAB20Q9NX57 234 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 KCTD5Q9NXV2 234 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 GOLGA6AQ9NYA3 693 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 MPP6Q9NZW5 540 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 COQ4Q9Y3A0 265 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 ABCA13Q86UQ4 5058 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 ANKRD62A6NC57 917 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 OR5K3A6NET4 321 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 TMCO5BA8MYB1 307 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 CDC40O60508 579 aaKnown RBP eCLIP7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 PRMT3O60678 531 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 PAGE1O75459 146 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 TMCC1O94876 653 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 FBXO21O94952 628 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 RHOXF2BP0C7M4 288 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 TMEM253P0C7T8 217 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 ITGAMP11215 1152 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 COX6A1P12074 109 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 CD46P15529 392 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 IDUAP35475 653 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 PIK3CAP42336 1068 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 PREPP48147 710 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 MCCD1P59942 119 aaPredicted RBP7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 MTA1Q13330 715 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 TUBA3CQ13748 450 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 MESDQ14696 234 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 OR1C1Q15619 314 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 NKG7Q16617 165 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 CMPK2Q5EBM0 449 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 ARTNQ5T4W7 220 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 RIPPLY2Q5TAB7 128 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 CYB5R2Q6BCY4 276 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 SPINK14Q6IE38 97 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 PPP1R2P3Q6NXS1 205 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 TUBA3EQ6PEY2 450 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 TRIM72Q6ZMU5 477 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 PLEKHM3Q6ZWE6 761 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 PEX26Q7Z412 305 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 LMO3Q8TAP4 145 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 SLC35F5Q8WV83 523 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 COX14Q96I36 57 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 ZNF641Q96N77 438 aaPredicted RBP7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 TNFRSF13CQ96RJ3 184 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 NCAPGQ9BPX3 1015 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 USB1Q9BQ65 265 aaKnown RBP7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 RHOXF2Q9BQY4 288 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 EML4Q9HC35 981 aaKnown RBP7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 VPS18Q9P253 973 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 HESX1Q9UBX0 185 aa7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 MTRF1LQ9UGC7 380 aaKnown RBP7.09□□□□□ -1.27
EXOSC3-206ENST00000489414 IGLV3-10A0A075B6K4 115 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 NSG1A0A0A6YYJ2 146 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 HYKKA2RU49 373 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 SH3D21A4FU49 640 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 SLC35F4A4IF30 521 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 OR52A4PA6NMU1 304 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 A8MX80 341 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 FAM47E-STBD1D6RA91 191 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 FOXN3O00409 490 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 DDX3XO00571 662 aaKnown RBP eCLIP7.08□□□□□ -1.283e-15■■□□□ 13.5
EXOSC3-206ENST00000489414 MAP2K7O14733 419 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 TFECO14948 347 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 SRGAP2O75044 1071 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 FTCDO95954 541 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 ALBP02768 609 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 KRT5P13647 590 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 ITGAXP20702 1163 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 BMP5P22003 454 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 TBXAS1P24557 533 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 ACVR1BP36896 505 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 ACVRL1P37023 503 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 NSG1P42857 185 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 KPNA2P52292 529 aaKnown RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 GCNT1Q02742 428 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 DPTQ07507 201 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 CNGA3Q16281 694 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 GLE1Q53GS7 698 aaKnown RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 TFDP3Q5H9I0 405 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 CFAP58Q5T655 872 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 MEI1Q5TIA1 1274 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 TXNRD3NBQ6F5E7 133 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 WDR93Q6P2C0 686 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 LEKR1Q6ZMV7 388 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 SHISA6Q6ZSJ9 500 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 NDUFAF7Q7L592 441 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 HDXQ7Z353 690 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms