RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.76□□□□□ -1.01
SSBP1-212ENST00000489378 TSGA13Q96PP4 275 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 TRIM51Q9BSJ1 452 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 POLDIP3Q9BY77 421 aaKnown RBP8.76□□□□□ -1.01
SSBP1-212ENST00000489378 XPO4Q9C0E2 1151 aaKnown RBP8.76□□□□□ -1.01
SSBP1-212ENST00000489378 RNF32Q9H0A6 362 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 CBX8Q9HC52 389 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 FANCLQ9NW38 375 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 SPHK1Q9NYA1 384 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 EURLQ9NYK6 297 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 ADAM21Q9UKJ8 722 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 NXT1Q9UKK6 140 aaKnown RBP8.76□□□□□ -1.01
SSBP1-212ENST00000489378 PLCL2Q9UPR0 1127 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 HEBP2Q9Y5Z4 205 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 TMCO5BA8MYB1 307 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 GAPDHSO14556 408 aaPredicted RBP8.75□□□□□ -1.01
SSBP1-212ENST00000489378 DSCR3O14972 297 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 SGTAO43765 313 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 CD48P09326 243 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 ITGAMP11215 1152 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 PIM1P11309 404 aaPredicted RBP8.75□□□□□ -1.01
SSBP1-212ENST00000489378 ATP1A3P13637 1013 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 FDXRP22570 491 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 MCM3P25205 808 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 AKT1P31749 480 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 DGKQP52824 942 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 ALDH6A1Q02252 535 aaKnown RBP8.75□□□□□ -1.01
SSBP1-212ENST00000489378 PPP2R5EQ16537 467 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 PCSK7Q16549 785 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 IFI16Q16666 785 aaKnown RBP8.75□□□□□ -1.01
SSBP1-212ENST00000489378 LONRF2Q1L5Z9 754 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 NCBP2-AS2Q69YL0 99 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 NDUFAF7Q7L592 441 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 DLG3Q92796 817 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 HGH1Q9BTY7 390 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 HES7Q9BYE0 225 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 HAUS2Q9NVX0 235 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 LRFN1Q9P244 771 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 ICKQ9UPZ9 632 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 ASB1Q9Y576 335 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 MAU2Q9Y6X3 613 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 ZANQ9Y493 2812 aa8.75□□□□□ -1.01
SSBP1-212ENST00000489378 A0A0J9YY10 115 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 KCNK1O00180 336 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 PRRG2O14669 202 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ASNA1O43681 348 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 TSPAN12O95859 305 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 MSH3P20585 1137 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 PCK1P35558 622 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 CARSP49589 748 aaKnown RBP8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ST13P50502 369 aaKnown RBP8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ARSFP54793 590 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 EEF1A2Q05639 463 aaKnown RBP8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ZNF33BQ06732 778 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ZBTB17Q13105 803 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 PAFAH1B3Q15102 231 aaKnown RBP8.74□□□□□ -1.01
SSBP1-212ENST00000489378 NOMO1Q15155 1222 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ATP13A4Q4VNC1 1196 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 BOLA3Q53S33 107 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 CCDC122Q5T0U0 273 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ABHD17BQ5VST6 288 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 CNSTQ6PJW8 725 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 SARM1Q6SZW1 724 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 UNC5AQ6ZN44 842 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ARHGEF18Q6ZSZ5 1173 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 NEK10Q6ZWH5 1172 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 NLRP9Q7RTR0 991 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 STT3BQ8TCJ2 826 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 MBD6Q96DN6 1003 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 RMND5BQ96G75 393 aaPredicted RBP8.74□□□□□ -1.01
SSBP1-212ENST00000489378 FRMD6Q96NE9 622 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 GPATCH1Q9BRR8 931 aaKnown RBP8.74□□□□□ -1.01
SSBP1-212ENST00000489378 CCM2Q9BSQ5 444 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 CEP41Q9BYV8 373 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 ETNK1Q9HBU6 452 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 KCNJ16Q9NPI9 418 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 KLHL1Q9NR64 748 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 CUTCQ9NTM9 273 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 STMN3Q9NZ72 180 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 C3orf18Q9UK00 162 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 RNF6Q9Y252 685 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 KLHL20Q9Y2M5 609 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 DNAJC13O75165 2243 aa8.74□□□□□ -1.01
SSBP1-212ENST00000489378 IGHV1-45A0A0A0MS14 117 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 GLYATL1P3A0A0U1RQE8 302 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 ASPDHA6ND91 283 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 TTI1O43156 1089 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 BUD23O43709 281 aaKnown RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 GADD45BO75293 160 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 MED26O95402 600 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 MLYCDO95822 493 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 CHRM5P08912 532 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-212ENST00000489378 ZGLP1P0C6A0 271 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 MYBL2P10244 700 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 PYGMP11217 842 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 PDHA2P29803 388 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 CHRNB4P30926 498 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 HMGCLP35914 325 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 SPAM1P38567 509 aa8.73□□□□□ -1.01
SSBP1-212ENST00000489378 RAB28P51157 221 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms