RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 F2RL2O00254 374 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 AREL1O15033 823 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 BCAT2O15382 392 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 SLC31A1O15431 190 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 RRP8O43159 456 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 MAGEC1O60732 1142 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 PMPCBO75439 489 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 GCATO75600 419 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 HAUS5O94927 633 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 HNRNPA2B1P22626 353 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 LMAN1P49257 510 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 SELENOPP49908 381 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 C21orf59P57076 290 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 CDK18Q07002 472 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 PARP6Q2NL67 630 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 TMEM52BQ4KMG9 183 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 TAF1BQ53T94 588 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 C4orf22Q6V702 233 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 MED25Q71SY5 747 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 DPPA4Q7L190 304 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 ZCCHC9Q8N567 271 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 DCBLD1Q8N8Z6 715 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 FAM71DQ8N9W8 422 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 LPCAT1Q8NF37 534 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 CCDC110Q8TBZ0 833 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 GRK7Q8WTQ7 553 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 ATG4AQ8WYN0 398 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 MAGOHBQ96A72 148 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 SCRN2Q96FV2 425 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 SERAC1Q96JX3 654 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 NDC1Q9BTX1 674 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 WRAP53Q9BUR4 548 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 MLPHQ9BV36 600 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 SLC17A9Q9BYT1 436 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 C10orf88Q9H8K7 445 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 PAK5Q9P286 719 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 ITM2BQ9Y287 266 aa7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 DRG1Q9Y295 367 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 V9GYY5 206 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC12-221ENST00000489032 GOLGA4Q13439 2230 aaKnown RBP7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 COL6A6A6NMZ7 2263 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 A0A0J9YYE9 177 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 A0A1W2PPL8 197 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 IGLON5A6NGN9 336 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 ANKRD66B4E2M5 251 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 B8ZZF3 427 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 E7EVH7 732 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 F5H423 210 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 PSMD11O00231 422 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 FPGTO14772 594 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 LATO43561 262 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 ERLIN1O75477 346 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 NDST3O95803 873 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 PAK4O96013 591 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 MT-CYBP00156 380 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 EPOP01588 193 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 TRBC1P01850 177 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 PRKCGP05129 697 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 IGHV4-34P06331 123 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 MMP2P08253 660 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 PDHA1P08559 390 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 C6P13671 934 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 ZNF30P17039 623 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 CTPS1P17812 591 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 HLA-DPA1P20036 260 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 PSMB4P28070 264 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 FDFT1P37268 417 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 MMP12P39900 470 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 EIF2S3P41091 472 aaKnown RBP7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 PIK3CGP48736 1102 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 RAB1AP62820 205 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 NKX6-1P78426 367 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 GALNT3Q14435 633 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 BRD3Q15059 726 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 ACOX1Q15067 660 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 OASLQ15646 514 aaKnown RBP7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 ZNF284Q2VY69 593 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 KHDC1LQ5JSQ8 128 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 SEL1L3Q68CR1 1132 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 NAPEPLDQ6IQ20 393 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 IL27RAQ6UWB1 636 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 Q6ZSN1 163 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 CHST15Q7LFX5 561 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 KDELC2Q7Z4H8 507 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 DENND6BQ8NEG7 585 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 IPMKQ8NFU5 416 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 SPATA22Q8NHS9 363 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 PIH1D2Q8WWB5 315 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 ASB12Q8WXK4 309 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 KLK6Q92876 244 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 MS4A14Q96JA4 679 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 CAPZA3Q96KX2 299 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 USP29Q9HBJ7 922 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 TM9SF3Q9HD45 589 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 PPIL1Q9Y3C6 166 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 ANKRD36A6QL64 1941 aa7.95□□□□□ -1.14
TRAPPC12-221ENST00000489032 ATMQ13315 3056 aa7.94□□□□□ -1.14
TRAPPC12-221ENST00000489032 COL12A1Q99715 3063 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms