RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DHX34Q14147 1143 aaKnown RBP11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 SSPNQ14714 243 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 NADK2Q4G0N4 442 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 ANKRD20A4Q4UJ75 823 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 ACSBG2Q5FVE4 666 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 KIAA0930Q6ICG6 404 aaPredicted RBP11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 CCDC137Q6PK04 289 aaKnown RBP11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 TTLL10Q6ZVT0 673 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 MED25Q71SY5 747 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 RAB43Q86YS6 212 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 CILP2Q8IUL8 1156 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 RAB42Q8N4Z0 105 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 TMEM102Q8N9M5 508 aaPredicted RBP11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 DENND1AQ8TEH3 1009 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 COG1Q8WTW3 980 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 MIPEPQ99797 713 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 RAB11FIP5Q9BXF6 653 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 SLC22A11Q9NSA0 550 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 NEU2Q9Y3R4 380 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 PIKFYVEQ9Y2I7 2098 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 FAM237BA0A1B0GVD1 139 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MAGEB16A2A368 324 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 TTLL8A6PVC2 850 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 CTSVO60911 334 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 CEACAM4O75871 244 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MATN4O95460 622 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MLNP12872 115 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 PKMP14618 531 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 OGNP20774 298 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 CCNFP41002 786 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 FOLR3P41439 243 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 RRADP55042 308 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 ADARP55265 1226 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 CTBP1Q13363 440 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 THOC5Q13769 683 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 FASTKQ14296 549 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 GBX1Q14549 363 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 CYP1B1Q16678 543 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 ZC3H12BQ5HYM0 836 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 PAPD7Q5XG87 772 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 ZNF470Q6ECI4 717 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MRGPREQ86SM8 312 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 REXO1L1PQ8IX06 675 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 SLC35F6Q8N357 371 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MCUQ8NE86 351 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 OR2Y1Q8NGV0 311 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MAGEC3Q8TD91 643 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 DLG3Q92796 817 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 ZUFSPQ96AP4 578 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MIB2Q96AX9 1013 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 ZNF669Q96BR6 464 aaPredicted RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 PTERQ96BW5 349 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 SERPINB12Q96P63 405 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 NAP1L3Q99457 506 aaPredicted RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 SELENOSQ9BQE4 189 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 NUDT9Q9BW91 350 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 XAB2Q9HCS7 855 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 ZNF451Q9Y4E5 1061 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MRFAP1Q9Y605 127 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 MAD1L1Q9Y6D9 718 aa11.45□□□□□ -0.58
CCHCR1-215ENST00000488920 ZCWPW2A0A1B0GU75 182 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 A0A1W2PPV9 198 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 CTAGE9A4FU28 777 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 ARHGEF33A8MVX0 844 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 TARM1B6A8C7 271 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 E5RI56 91 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 MASP2O00187 686 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 PGRMC1O00264 195 aaKnown RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 PEX12O00623 359 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 NRP2O60462 931 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 UMODP07911 640 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 CD63P08962 238 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 ITGAXP20702 1163 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 ATP5DP30049 168 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 GCGRP47871 477 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 ARSFP54793 590 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 VSX2P58304 361 aaPredicted RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 YBX1P67809 324 aaKnown RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 GRM7Q14831 915 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 CYP2A13Q16696 494 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 KLHL38Q2WGJ6 581 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 WASHC2DQ5SRD0 308 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 ARMC3Q5W041 872 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 MRPL14Q6P1L8 145 aaKnown RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 PPP1R32Q7Z5V6 425 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 DENND6AQ8IWF6 608 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 AGGF1Q8N302 714 aaeCLIP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 METTL27Q8N6F8 245 aaPredicted RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 OR2L3Q8NG85 312 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 OR2A1Q8NGT9 310 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 OR9A1PQ8NGU1 263 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 HMGCLL1Q8TB92 370 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 OSBPL9Q96SU4 736 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 SLC30A3Q99726 388 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 ACAT2Q9BWD1 397 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 FBXO6Q9NRD1 293 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms