RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 GLRBP48167 497 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 RPL14P50914 215 aaKnown RBP18.83■□□□□ 0.61
CCM2-216ENST00000488727 GBX1Q14549 363 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 ZNF460Q14592 562 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 KPNB1Q14974 876 aaKnown RBP18.83■□□□□ 0.61
CCM2-216ENST00000488727 ACSBG2Q5FVE4 666 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 VWA5B1Q5TIE3 1220 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 FAM45BPQ6NSW5 357 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 NET1Q7Z628 596 aaPredicted RBP18.83■□□□□ 0.61
CCM2-216ENST00000488727 SCUBE1Q8IWY4 988 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 ZBTB2Q8N680 514 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 FAM45AQ8TCE6 357 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 TMEM159Q96B96 161 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 ZNF624Q9P2J8 865 aaPredicted RBP18.83■□□□□ 0.61
CCM2-216ENST00000488727 VWA7Q9Y334 891 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 CFAP20Q9Y6A4 193 aaKnown RBP18.83■□□□□ 0.61
CCM2-216ENST00000488727 KPNA5O15131 536 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 VPS26AO75436 327 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 SLCO2B1O94956 709 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 CHRNGP07510 517 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 SLC35G4P0C7Q5 338 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 SLC26A3P40879 764 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 TRMT5Q32P41 509 aaKnown RBP18.83■□□□□ 0.6
CCM2-216ENST00000488727 C14orf28Q4W4Y0 310 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 SLC9B1Q4ZJI4 515 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 ARL13AQ5H913 290 aaPredicted RBP18.83■□□□□ 0.6
CCM2-216ENST00000488727 TECRLQ5HYJ1 363 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 CAPRIN2Q6IMN6 1127 aaKnown RBP18.83■□□□□ 0.6
CCM2-216ENST00000488727 SLC22A15Q8IZD6 547 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 MAPK15Q8TD08 544 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 CMTM5Q96DZ9 223 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 CNDP2Q96KP4 475 aaKnown RBP18.83■□□□□ 0.6
CCM2-216ENST00000488727 INSM2Q96T92 566 aaPredicted RBP18.83■□□□□ 0.6
CCM2-216ENST00000488727 TAS2R13Q9NYV9 303 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 FTSJ1Q9UET6 329 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 CDV3Q9UKY7 258 aaKnown RBP18.83■□□□□ 0.6
CCM2-216ENST00000488727 DHRS7Q9Y394 339 aa18.83■□□□□ 0.6
CCM2-216ENST00000488727 PRAMEF33A0A0G2JMD5 474 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 LDOC1O95751 146 aaPredicted RBP18.82■□□□□ 0.6
CCM2-216ENST00000488727 CD9P21926 228 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 ATP5F1P24539 256 aaPredicted RBP18.82■□□□□ 0.6
CCM2-216ENST00000488727 NAGLUP54802 743 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 NAA25Q14CX7 972 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 RSPO4Q2I0M5 234 aaPredicted RBP18.82■□□□□ 0.6
CCM2-216ENST00000488727 FAM83EQ2M2I3 478 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 PLEKHS1Q5SXH7 462 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 PIWIL4Q7Z3Z4 852 aaKnown RBP18.82■□□□□ 0.6
CCM2-216ENST00000488727 PDZD3Q86UT5 571 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCM2-216ENST00000488727 ULK2Q8IYT8 1036 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 LSMEM2Q8N112 164 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 ARL14Q8N4G2 192 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 DEFB124Q8NES8 71 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 GLMNQ92990 594 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 CCDC126Q96EE4 140 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 TCF7L2Q9NQB0 619 aa18.82■□□□□ 0.6
CCM2-216ENST00000488727 KIR2DS5A0A0G2JLQ3 304 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 A0A0G2JNG1 304 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 OR5K4A6NMS3 321 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 KIR2DS3K7RE56 304 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 SLC22A2O15244 555 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 CIB2O75838 187 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 LTA4HP09960 611 aaKnown RBP18.81■□□□□ 0.6
CCM2-216ENST00000488727 CKMT1AP12532 417 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 ACADLP28330 430 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 SLC19A1P41440 591 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 HALP42357 657 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 PLOD1Q02809 727 aaPredicted RBP18.81■□□□□ 0.6
CCM2-216ENST00000488727 KIR2DS5Q14953 304 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 NR0B2Q15466 257 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 RPE65Q16518 533 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 DUS1LQ6P1R4 473 aaKnown RBP18.81■□□□□ 0.6
CCM2-216ENST00000488727 WDR60Q8WVS4 1066 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 C12orf66Q96MD2 445 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 CCDC28BQ9BUN5 200 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 IMP3Q9NV31 184 aaKnown RBP18.81■□□□□ 0.6
CCM2-216ENST00000488727 PADI4Q9UM07 663 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 ASXL3Q9C0F0 2248 aa18.81■□□□□ 0.6
CCM2-216ENST00000488727 RP1P56715 2156 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 PPM1DO15297 605 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 PSMG1O95456 288 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 SLC2A4P14672 509 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 XRCC1P18887 633 aaPredicted RBP18.8■□□□□ 0.6
CCM2-216ENST00000488727 UBE2IP63279 158 aaKnown RBP18.8■□□□□ 0.6
CCM2-216ENST00000488727 MXRA7P84157 204 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 CMPK2Q5EBM0 449 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 GUSBP11Q6P575 273 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 PAQR3Q6TCH7 311 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 CPNE9Q8IYJ1 553 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 CNDP1Q96KN2 507 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 UBXN10Q96LJ8 280 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 KLHL42Q9P2K6 505 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 STOML1Q9UBI4 398 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 CPNE7Q9UBL6 633 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 TRMT6Q9UJA5 497 aaKnown RBP18.8■□□□□ 0.6
CCM2-216ENST00000488727 TSR3Q9UJK0 312 aaKnown RBP18.8■□□□□ 0.6
CCM2-216ENST00000488727 RBP1P09455 135 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 MTHFD1P11586 935 aaKnown RBP18.8■□□□□ 0.6
CCM2-216ENST00000488727 NCF2P19878 526 aaPredicted RBP18.8■□□□□ 0.6
CCM2-216ENST00000488727 FASLGP48023 281 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms