RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 DHX9Q08211 1270 aaKnown RBP17.07■□□□□ 0.32
ITGB1-215ENST00000488494 NCF4Q15080 339 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 SF1Q15637 639 aaKnown RBP17.07■□□□□ 0.32
ITGB1-215ENST00000488494 KLHL38Q2WGJ6 581 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 TTLL9Q3SXZ7 439 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 MSS51Q4VC12 460 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 HSP90AA5PQ58FG0 334 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 C1orf189Q5VU69 101 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 ZNF385CQ66K41 422 aaPredicted RBP17.07■□□□□ 0.32
ITGB1-215ENST00000488494 KCNMB4Q86W47 210 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 LMNTD2Q8IXW0 634 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 ZNF655Q8N720 491 aaPredicted RBP17.07■□□□□ 0.32
ITGB1-215ENST00000488494 MAGEC3Q8TD91 643 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 KCNJ9Q92806 393 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 TRIM51Q9BSJ1 452 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 NLNQ9BYT8 704 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 ZNF71Q9NQZ8 489 aaPredicted RBP17.07■□□□□ 0.32
ITGB1-215ENST00000488494 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 IARS2Q9NSE4 1012 aaKnown RBP17.07■□□□□ 0.32
ITGB1-215ENST00000488494 INTS7Q9NVH2 962 aaKnown RBP17.07■□□□□ 0.32
ITGB1-215ENST00000488494 EURLQ9NYK6 297 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 SPATA7Q9P0W8 599 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 SNX7Q9UNH6 387 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 SRPK3Q9UPE1 567 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 MED16Q9Y2X0 877 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 AP1M2Q9Y6Q5 423 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 FAM169AQ9Y6X4 670 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 PYCARD-AS1I3L0S3 204 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 J3QKU1 62 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 FANCGO15287 622 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 RFPL1O75677 317 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 CAPN1P07384 714 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 BBS9Q3SYG4 887 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 CPZQ66K79 652 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 FCRL6Q6DN72 434 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 SYDE1Q6ZW31 735 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-215ENST00000488494 PCGF5Q86SE9 256 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 PTRH1Q86Y79 214 aaKnown RBP17.06■□□□□ 0.32
ITGB1-215ENST00000488494 HMGCLL1Q8TB92 370 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 ABHD17AQ96GS6 310 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 RUNDC3BQ96NL0 473 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 MIPEPQ99797 713 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 DPH2Q9BQC3 489 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-215ENST00000488494 DHCR7Q9UBM7 475 aaKnown RBP17.06■□□□□ 0.32
ITGB1-215ENST00000488494 TCFL5Q9UL49 500 aa17.06■□□□□ 0.32
ITGB1-215ENST00000488494 MYO1CO00159 1063 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 PSIP1O75475 530 aaKnown RBP17.05■□□□□ 0.32
ITGB1-215ENST00000488494 TTC4O95801 387 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 CATP04040 527 aaKnown RBP17.05■□□□□ 0.32
ITGB1-215ENST00000488494 CBSLP0DN79 551 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 ERVK-10P10266 1014 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 AGXTP21549 392 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 IVDP26440 423 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 CBSP35520 551 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 FASTKQ14296 549 aaKnown RBP17.05■□□□□ 0.32
ITGB1-215ENST00000488494 MORF4L2Q15014 288 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 CYP2A13Q16696 494 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 LACTB2Q53H82 288 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-215ENST00000488494 RHBDD2Q6NTF9 364 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 TLDC1Q6P9B6 456 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 FIGLAQ6QHK4 219 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 OR2L3Q8NG85 312 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 OR9A1PQ8NGU1 263 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 PROKR1Q8TCW9 393 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 CD200R1Q8TD46 325 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 THAP4Q8WY91 577 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 GBP5Q96PP8 586 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 GPR21Q99679 349 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 EBNA1BP2Q99848 306 aaKnown RBP17.05■□□□□ 0.32
ITGB1-215ENST00000488494 NDC1Q9BTX1 674 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 TRIM4Q9C037 500 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 TXLNGQ9NUQ3 528 aa17.05■□□□□ 0.32
ITGB1-215ENST00000488494 A0A1W2PPV9 198 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 MKRN2OSH3BPM6 223 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 TTI1O43156 1089 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 PRICKLE3O43900 615 aaPredicted RBP17.04■□□□□ 0.32
ITGB1-215ENST00000488494 NRP2O60462 931 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 DNAJB5O75953 348 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 HAUS5O94927 633 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 FKBP9O95302 570 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 SPTBP11277 2137 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 ERGP11308 486 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 NR1D1P20393 614 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 GRIA3P42263 894 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 CHAF1BQ13112 559 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 SLC9A5Q14940 896 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 SPANXN3Q5MJ09 141 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 HP1BP3Q5SSJ5 553 aaPredicted RBP17.04■□□□□ 0.32
ITGB1-215ENST00000488494 NEK10Q6ZWH5 1172 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 MCATQ8IVS2 390 aaKnown RBP17.04■□□□□ 0.32
ITGB1-215ENST00000488494 IGDCC3Q8IVU1 814 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 CPNE9Q8IYJ1 553 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 C2CD4AQ8NCU7 369 aaPredicted RBP17.04■□□□□ 0.32
ITGB1-215ENST00000488494 ADAMTS17Q8TE56 1095 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 CFAP36Q96G28 342 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 PWWP2AQ96N64 755 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 NDNQ99608 321 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 NAT9Q9BTE0 207 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 TRIM55Q9BYV6 548 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 SLC17A6Q9P2U8 582 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms