RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 APPL2Q8NEU8 664 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 MOSPD2Q8NHP6 518 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 FAM76AQ8TAV0 307 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 FAM81BQ96LP2 452 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 SGK494Q96LW2 274 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 PGLYRP2Q96PD5 576 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 SRSF8Q9BRL6 282 aaKnown RBP4.02□□□□□ -1.77
ITGB1-214ENST00000488427 RBM4Q9BWF3 364 aaKnown RBP4.02□□□□□ -1.77
ITGB1-214ENST00000488427 PANK2Q9BZ23 570 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 PAG1Q9NWQ8 432 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 FLRT3Q9NZU0 649 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 LARSQ9P2J5 1176 aaKnown RBP4.02□□□□□ -1.77
ITGB1-214ENST00000488427 ADD3Q9UEY8 706 aaKnown RBP4.02□□□□□ -1.77
ITGB1-214ENST00000488427 PPIEQ9UNP9 301 aaKnown RBP4.02□□□□□ -1.77
ITGB1-214ENST00000488427 TRIM17Q9Y577 477 aa4.02□□□□□ -1.77
ITGB1-214ENST00000488427 SMG6Q86US8 1419 aaKnown RBP4.02□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF646O15015 1829 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-214ENST00000488427 PTPRZ1P23471 2315 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-214ENST00000488427 ACACBO00763 2458 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 A0A087WYN8 130 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 A0A1W2PRB8 838 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 A6NL46 340 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 SLCO1B7G3V0H7 640 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 PSMD14O00487 310 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 PLGP00747 810 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-214ENST00000488427 SELLP14151 372 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 LIFP15018 202 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 RFC4P35249 363 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 DCTP40126 519 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 RBM39Q14498 530 aaKnown RBP4.01□□□□□ -1.77
ITGB1-214ENST00000488427 IRF3Q14653 427 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 DLG2Q15700 870 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 CEP85LQ5SZL2 805 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 DGLUCYQ7Z3D6 616 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 TRPT1Q86TN4 253 aaKnown RBP4.01□□□□□ -1.77
ITGB1-214ENST00000488427 ISCA2Q86U28 154 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 OR2T12Q8NG77 320 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 PRPF31Q8WWY3 499 aaKnown RBP4.01□□□□□ -1.77
ITGB1-214ENST00000488427 NUDT16L1Q9BRJ7 211 aaKnown RBP4.01□□□□□ -1.77
ITGB1-214ENST00000488427 RHNO1Q9BSD3 238 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 CPSF2Q9P2I0 782 aaKnown RBP4.01□□□□□ -1.77
ITGB1-214ENST00000488427 GAB2Q9UQC2 676 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 SNX8Q9Y5X2 465 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 SPIN1Q9Y657 262 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-214ENST00000488427 PIK3C2GO75747 1445 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 TJP1Q07157 1748 aa4.01□□□□□ -1.77
ITGB1-214ENST00000488427 MAP1BP46821 2468 aaKnown RBP4□□□□□ -1.77
ITGB1-214ENST00000488427 hCG_1807616A0A1W2PRN6 198 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 CIDEAO60543 219 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 ITGA3P26006 1051 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 EPHA2P29317 976 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 CHRNB4P30926 498 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 HOXC8P31273 242 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 EIF2DP41214 584 aaKnown RBP4□□□□□ -1.77
ITGB1-214ENST00000488427 SLC9A3P48764 834 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 PDX1P52945 283 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 UBXN2AP68543 259 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 CDK3Q00526 305 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 STK4Q13043 487 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 PPIGQ13427 754 aaKnown RBP eCLIP4□□□□□ -1.77
ITGB1-214ENST00000488427 ZC2HC1CQ53FD0 456 aaPredicted RBP4□□□□□ -1.77
ITGB1-214ENST00000488427 LINGO4Q6UY18 593 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 RBMS3Q6XE24 437 aaKnown RBP4□□□□□ -1.77
ITGB1-214ENST00000488427 DENND5BQ6ZUT9 1274 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 USP50Q70EL3 339 aaPredicted RBP4□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF554Q86TJ5 538 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 GPC2Q8N158 579 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 CIARTQ8N365 385 aaPredicted RBP4□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF248Q8NDW4 579 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 EXD1Q8NHP7 514 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 HCAR2Q8TDS4 363 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 CCDC107Q8WV48 283 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 DAZLQ92904 295 aaKnown RBP4□□□□□ -1.77
ITGB1-214ENST00000488427 LGALS12Q96DT0 336 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 INTS10Q9NVR2 710 aaKnown RBP4□□□□□ -1.77
ITGB1-214ENST00000488427 C2orf42Q9NWW7 574 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 TBC1D29Q9UFV1 150 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 PLAGL1Q9UM63 463 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 ADGRB1O14514 1584 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 NFAT5O94916 1531 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF831Q5JPB2 1677 aa4□□□□□ -1.77
ITGB1-214ENST00000488427 ASTN2O75129 1339 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 A0A1W2PR77 199 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 OR2A25A4D2G3 310 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 CYSRT1A8MQ03 144 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 MAGEB17A8MXT2 336 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 K7ENM7 598 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 PAPSS1O43252 624 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 EDN1P05305 212 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 ACSL1P33121 698 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF75DP51815 510 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 PRKCZQ05513 592 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 CALD1Q05682 793 aaKnown RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 BAATQ14032 418 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 TMEM30BQ3MIR4 351 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 TMEM31Q5JXX7 168 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 WDR78Q5VTH9 848 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 ADGRA1Q86SQ6 560 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 LDB1Q86U70 411 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 DNAAF5Q86Y56 855 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms