RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLC18A1P54219 525 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 AP1S2P56377 157 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 CLDN6P56747 220 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 WDR4P57081 412 aaKnown RBP12.38□□□□□ -0.43
HDAC6-229ENST00000486665 CDKL1Q00532 357 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 CYP2A13Q16696 494 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 PFKFB4Q16877 469 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 HSP90B2PQ58FF3 399 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 GUSBP11Q6P575 273 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 ZYG11AQ6WRX3 759 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 CCDC63Q8NA47 563 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 PDPRQ8NCN5 879 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 PPFIBP2Q8ND30 876 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 MGARPQ8TDB4 240 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 ZNF480Q8WV37 535 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 LCN9Q8WX39 176 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 ESAMQ96AP7 390 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 FBXL8Q96CD0 374 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 PHF21BQ96EK2 531 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 SLC38A3Q99624 504 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 EGFL8Q99944 293 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 ATG10Q9H0Y0 220 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 UCK1Q9HA47 277 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 PTBP2Q9UKA9 531 aaKnown RBP12.38□□□□□ -0.43
HDAC6-229ENST00000486665 CPED1A4D0V7 1026 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 RHPN2P1A8MT19 583 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 A8MT66 165 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 BTN3A3O00478 584 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 TM9SF1O15321 606 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 FLRT2O43155 660 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 B4GAT1O43505 415 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 NUDT21O43809 227 aaKnown RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 SMIM24O75264 130 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ZWINTO95229 277 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 LDOC1O95751 146 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ANXA5P08758 320 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 DHRS4L1P0CG22 281 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 MYL2P10916 166 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ERGP11308 486 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 CKMT1AP12532 417 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 GFAPP14136 432 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 GLB1P16278 677 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ATP5F1P24539 256 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 PKLRP30613 574 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ALDH3A1P30838 453 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 AGTR2P50052 363 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 RAB28P51157 221 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 PNLIPRP1P54315 467 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 OR1D5P58170 312 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 PPP2R2AP63151 447 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 GPS2Q13227 327 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 BIRC2Q13490 618 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 CDKL4Q5MAI5 379 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 PERM1Q5SV97 790 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 SULT1C3Q6IMI6 304 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 AGTRAPQ6RW13 159 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ZNF438Q7Z4V0 828 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 AMIGO1Q86WK6 493 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 C10orf107Q8IVU9 208 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 RBM12BQ8IXT5 1001 aaKnown RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 LRRC56Q8IYG6 542 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 FBXO39Q8N4B4 442 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 PTGR2Q8N8N7 351 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 Q8N9G6 341 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 LINC01555Q8NAE3 123 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 SH3KBP1Q96B97 665 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 MOCOSQ96EN8 888 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 CNDP2Q96KP4 475 aaKnown RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 TMEM79Q9BSE2 394 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 MECRQ9BV79 373 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ACSS2Q9NR19 701 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 FAM53CQ9NYF3 392 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 SPATA7Q9P0W8 599 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 COPG2Q9UBF2 871 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ASB1Q9Y576 335 aa12.37□□□□□ -0.43
HDAC6-229ENST00000486665 ARID1BQ8NFD5 2236 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-229ENST00000486665 WDR91A4D1P6 747 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 EME2A4GXA9 379 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 OR6C74A6NCV1 312 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 PABPN1LA6NDY0 278 aaKnown RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 TRABD2BA6NFA1 517 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 E7ENX8 843 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 SIX3O95343 332 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 S100BP04271 92 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 BPGMP07738 259 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 TYRP1P17643 537 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 TAC1P20366 129 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 NR1D1P20393 614 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 PEBP1P30086 187 aaKnown RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 GGT5P36269 586 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 GDF5P43026 501 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 SLC6A12P48065 614 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 SERPINB4P48594 390 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 HSPA7P48741 367 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 PRKAA2P54646 552 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 TAP2Q03519 686 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 CYP4F3Q08477 520 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 NAE1Q13564 534 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 PCLAFQ15004 111 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms