RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 SNRNP27Q8WVK2 155 aaKnown RBP5.67□□□□□ -1.5
RTN4-214ENST00000486085 SECISBP2LQ93073 1101 aaKnown RBP5.67□□□□□ -1.5
RTN4-214ENST00000486085 ZNF583Q96ND8 569 aa5.67□□□□□ -1.5
RTN4-214ENST00000486085 UTP14AQ9BVJ6 771 aaKnown RBP5.67□□□□□ -1.5
RTN4-214ENST00000486085 MOV10L1Q9BXT6 1211 aaKnown RBP5.67□□□□□ -1.5
RTN4-214ENST00000486085 PTTG2Q9NZH5 202 aa5.67□□□□□ -1.5
RTN4-214ENST00000486085 FAF1Q9UNN5 650 aaPredicted RBP5.67□□□□□ -1.5
RTN4-214ENST00000486085 NIP7Q9Y221 180 aaKnown RBP eCLIP5.67□□□□□ -1.5
RTN4-214ENST00000486085 ZNF541Q9H0D2 1346 aa5.67□□□□□ -1.5
RTN4-214ENST00000486085 DLEC1Q9Y238 1755 aa5.67□□□□□ -1.5
RTN4-214ENST00000486085 TEX13DA0A0J9YY54 714 aaPredicted RBP5.66□□□□□ -1.5
RTN4-214ENST00000486085 TCERG1O14776 1098 aaKnown RBP5.66□□□□□ -1.5
RTN4-214ENST00000486085 XPNPEP2O43895 674 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 LDLRP01130 860 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 ATP1A1P05023 1023 aaKnown RBP5.66□□□□□ -1.5
RTN4-214ENST00000486085 UBTFL1P0CB47 393 aaPredicted RBP5.66□□□□□ -1.5
RTN4-214ENST00000486085 CDK3Q00526 305 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 IL11RAQ14626 422 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 LETM2Q2VYF4 491 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 CBWD6Q4V339 395 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 ASPRV1Q53RT3 343 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 CBWD3Q5JTY5 395 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 C9orf152Q5JTZ5 239 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 ERMARDQ5T6L9 678 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 C6orf163Q5TEZ5 329 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 SUSD4Q5VX71 490 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 PRR5LQ6MZQ0 368 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 KRT74Q7RTS7 529 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 PLPPR4Q7Z2D5 763 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 TMEM173Q86WV6 379 aaPredicted RBP5.66□□□□□ -1.5
RTN4-214ENST00000486085 ITPRIPQ8IWB1 547 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 DAZLQ92904 295 aaKnown RBP5.66□□□□□ -1.5
RTN4-214ENST00000486085 MTERF3Q96E29 417 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 OLFM1Q99784 485 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 FNDC11Q9BVV2 318 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 HAO2Q9NYQ3 351 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 ANAPC2Q9UJX6 822 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 TNNQ9UQP3 1299 aa5.66□□□□□ -1.5
RTN4-214ENST00000486085 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.66□□□□□ -1.5
RTN4-214ENST00000486085 LRRC37AA6NMS7 1700 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 KIAA1551Q9HCM1 1747 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 ANKRD31Q8N7Z5 1873 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 A0A0U1RQG5 324 aaPredicted RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 SYNCRIPO60506 623 aaKnown RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 CTSVO60911 334 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 HMMRO75330 724 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 CIAO1O76071 339 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 BAG4O95429 457 aaKnown RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 CKMT2P17540 419 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 MBTD1Q05BQ5 628 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 ARL16Q0P5N6 197 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 SNTB1Q13884 538 aaKnown RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 FAM76BQ5HYJ3 339 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 RPUSD3Q6P087 351 aaKnown RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 GDPD4Q6W3E5 623 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 DENND5BQ6ZUT9 1274 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 CAMKMTQ7Z624 323 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 ZBTB8BQ8NAP8 495 aaPredicted RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 TSPAN14Q8NG11 270 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 OR10S1Q8NGN2 331 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 CFAP61Q8NHU2 1237 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 TEKT4Q8WW24 435 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 SPACA9Q96E40 222 aaPredicted RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 ZNF830Q96NB3 372 aaPredicted RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 MS4A10Q96PG2 267 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 OPA3Q9H6K4 179 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 TBC1D17Q9HA65 648 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 UPF2Q9HAU5 1272 aaKnown RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 SLC38A7Q9NVC3 462 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 TRMT112Q9UI30 125 aaKnown RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 LRP12Q9Y561 859 aa5.65□□□□□ -1.5
RTN4-214ENST00000486085 SPIN1Q9Y657 262 aaPredicted RBP5.65□□□□□ -1.5
RTN4-214ENST00000486085 ABCC12Q96J65 1359 aa5.65□□□□□ -1.51
RTN4-214ENST00000486085 SNED1Q8TER0 1413 aa5.65□□□□□ -1.51
RTN4-214ENST00000486085 SRCAPQ6ZRS2 3230 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 IGLV5-45A0A087WSX0 123 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 A0A0B4J293 547 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 ELOVL7A1L3X0 281 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 PDE9AO76083 593 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 IGHV4-39P01824 125 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 CRYAAP02489 173 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 SERPINB2P05120 415 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 H1F0P07305 194 aaKnown RBP5.64□□□□□ -1.51
RTN4-214ENST00000486085 CBLP22681 906 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 HOXA1P49639 335 aaPredicted RBP5.64□□□□□ -1.51
RTN4-214ENST00000486085 CCR3P51677 355 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 ALCAMQ13740 583 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 NR1D2Q14995 579 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 CCDC152Q4G0S7 254 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 NBPF5PQ86XG9 351 aaPredicted RBP5.64□□□□□ -1.51
RTN4-214ENST00000486085 CRYBG2Q8N1P7 616 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 CNBD1Q8NA66 436 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 EXOC6Q8TAG9 804 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 NXNL1Q96CM4 212 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 PGAP3Q96FM1 320 aaPredicted RBP5.64□□□□□ -1.51
RTN4-214ENST00000486085 DOCK7Q96N67 2140 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 ABHD6Q9BV23 337 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 DPAGT1Q9H3H5 408 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 DCTPP1Q9H773 170 aa5.64□□□□□ -1.51
RTN4-214ENST00000486085 OSER1Q9NX31 292 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms