RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SMPDL3AQ92484 453 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 ESAMQ96AP7 390 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 MED8Q96G25 268 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 PAIP2Q9BPZ3 127 aaKnown RBP17.01■□□□□ 0.31
CHMP3-207ENST00000485465 MECRQ9BV79 373 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 CD244Q9BZW8 370 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 TWSG1Q9GZX9 223 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 CNOT10Q9H9A5 744 aaKnown RBP17.01■□□□□ 0.31
CHMP3-207ENST00000485465 TNPO3Q9Y5L0 923 aaKnown RBP17.01■□□□□ 0.31
CHMP3-207ENST00000485465 ARID1BQ8NFD5 2236 aaPredicted RBP17■□□□□ 0.31
CHMP3-207ENST00000485465 IGHV1OR21-1A0A087WYE8 117 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 OR5K3A6NET4 321 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 BIRC5O15392 142 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 ZW10O43264 779 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 B4GAT1O43505 415 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 STK16O75716 305 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 SIX3O95343 332 aaPredicted RBP17■□□□□ 0.31
CHMP3-207ENST00000485465 PROS1P07225 676 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 CHRM5P08912 532 aaPredicted RBP17■□□□□ 0.31
CHMP3-207ENST00000485465 TYRP1P17643 537 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 AMD1P17707 334 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 IMPDH1P20839 514 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 ACP1P24666 158 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 EEF1DP29692 281 aaKnown RBP17■□□□□ 0.31
CHMP3-207ENST00000485465 GDF5P43026 501 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 DNAJB13P59910 316 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 PCBP2Q15366 365 aaKnown RBP eCLIP17■□□□□ 0.316e-7■■■■■ 44.5
CHMP3-207ENST00000485465 LIPMQ5VYY2 423 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 CAPN13Q6MZZ7 669 aaPredicted RBP17■□□□□ 0.31
CHMP3-207ENST00000485465 KLHL35Q6PF15 583 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 SUSD1Q6UWL2 747 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 SPRED1Q7Z699 444 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 TAX1BP1Q86VP1 789 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 OOSP2Q86WS3 158 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 KIAA2013Q8IYS2 634 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 PYCR2Q96C36 320 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 CDC6Q99741 560 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 CCDC3Q9BQI4 270 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 SGPP1Q9BX95 441 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 EPB41L1Q9H4G0 881 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 CCDC177Q9NQR7 707 aaPredicted RBP17■□□□□ 0.31
CHMP3-207ENST00000485465 HRASLS2Q9NWW9 162 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 SPHK1Q9NYA1 384 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 OGFRQ9NZT2 677 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 ASB1Q9Y576 335 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 WDR87Q6ZQQ6 2873 aa17■□□□□ 0.31
CHMP3-207ENST00000485465 COL5A1P20908 1838 aaPredicted RBP17■□□□□ 0.31
CHMP3-207ENST00000485465 A0A1W2PPV9 198 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 WDR91A4D1P6 747 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 LRRC14BA6NHZ5 514 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 PRICKLE3O43900 615 aaPredicted RBP16.99■□□□□ 0.31
CHMP3-207ENST00000485465 TRIM13O60858 407 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 WDR47O94967 919 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 CHN1P15882 459 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 POLR2CP19387 275 aaPredicted RBP16.99■□□□□ 0.31
CHMP3-207ENST00000485465 CCND1P24385 295 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 PEBP1P30086 187 aaKnown RBP16.99■□□□□ 0.31
CHMP3-207ENST00000485465 TBPL1P62380 186 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 HERVK_113P63132 956 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 GPLD1P80108 840 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 TSTA3Q13630 321 aaPredicted RBP16.99■□□□□ 0.31
CHMP3-207ENST00000485465 KIR2DS3Q14952 304 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 ZNF678Q5SXM1 525 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 METTL2BQ6P1Q9 378 aaKnown RBP16.99■□□□□ 0.31
CHMP3-207ENST00000485465 THOC6Q86W42 341 aaKnown RBP16.99■□□□□ 0.31
CHMP3-207ENST00000485465 NUDCD3Q8IVD9 361 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 ARFGAP2Q8N6H7 521 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 OR10G6Q8NH81 332 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 RSC1A1Q92681 617 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 L3HYPDHQ96EM0 354 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 AHCYL2Q96HN2 611 aaKnown RBP16.99■□□□□ 0.31
CHMP3-207ENST00000485465 TMEM237Q96Q45 408 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 C1QTNF3Q9BXJ4 246 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 ERVK-6Q9BXR3 956 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 SLC32A1Q9H598 525 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 INTS7Q9NVH2 962 aaKnown RBP16.99■□□□□ 0.31
CHMP3-207ENST00000485465 FAM53CQ9NYF3 392 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 ENTPD2Q9Y5L3 495 aa16.99■□□□□ 0.31
CHMP3-207ENST00000485465 PIPSLA2A3N6 862 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 C2orf74A8MZ97 194 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 K7EPI3 171 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 TNFSF14O43557 240 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 CCNT2O60583 730 aaKnown RBP16.98■□□□□ 0.31
CHMP3-207ENST00000485465 RPS17P08708 135 aaKnown RBP16.98■□□□□ 0.31
CHMP3-207ENST00000485465 CD1CP29017 333 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 OAS2P29728 719 aaKnown RBP16.98■□□□□ 0.31
CHMP3-207ENST00000485465 CAPZBP47756 277 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 ATP1A2P50993 1020 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 NAGLUP54802 743 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 ASPHQ12797 758 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 PRKAA1Q13131 559 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 UNC50Q53HI1 259 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 NKAIN2Q5VXU1 208 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 ARMC6Q6NXE6 501 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 LRRC70Q7Z2Q7 622 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 NETO1Q8TDF5 533 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 SREK1Q8WXA9 508 aaKnown RBP16.98■□□□□ 0.31
CHMP3-207ENST00000485465 SLC22A18Q96BI1 424 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 PCBD2Q9H0N5 130 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 ABCF3Q9NUQ8 709 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms