RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 TSR3Q9UJK0 312 aaKnown RBP15.33■□□□□ 0.04
UPF3A-208ENST00000484246 RARRES3Q9UL19 164 aa15.33■□□□□ 0.04
UPF3A-208ENST00000484246 KRT87PA6NCN2 255 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 ESPNB1AK53 854 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 ISM1B1AKI9 464 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 AGRPO00253 132 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 MAP3K7O43318 606 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 PIAS1O75925 651 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 SLC16A8O95907 504 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 ENO2P09104 434 aaPredicted RBP15.32■□□□□ 0.04
UPF3A-208ENST00000484246 PVRP15151 417 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 CYP2A7P20853 494 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 SPRP35270 261 aaPredicted RBP15.32■□□□□ 0.04
UPF3A-208ENST00000484246 GABRA4P48169 554 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 PNLIPRP1P54315 467 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 UCNP55089 124 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 AP1S2P56377 157 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 FOXM1Q08050 763 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 KCNAB1Q14722 419 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 SLMAPQ14BN4 828 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 FBXO38Q6PIJ6 1188 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 TMEM207Q6UWW9 146 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 LRRC69Q6ZNQ3 347 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 TRIM73Q86UV7 250 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 PPP1R3BQ86XI6 285 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 CTAGE3PQ8IX95 158 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 NKAPQ8N5F7 415 aaKnown RBP15.32■□□□□ 0.04
UPF3A-208ENST00000484246 PPM1NQ8N819 430 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 OR2A1Q8NGT9 310 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 ZNF480Q8WV37 535 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 CYTH2Q99418 400 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 CTRCQ99895 268 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 FANCEQ9HB96 536 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 PARVBQ9HBI1 364 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 INTS7Q9NVH2 962 aaKnown RBP15.32■□□□□ 0.04
UPF3A-208ENST00000484246 CIDEBQ9UHD4 219 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 PILRAQ9UKJ1 303 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 NOVA2Q9UNW9 492 aaKnown RBP15.32■□□□□ 0.04
UPF3A-208ENST00000484246 WDFY3Q8IZQ1 3526 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 ACACAQ13085 2346 aa15.32■□□□□ 0.04
UPF3A-208ENST00000484246 E7ENX8 843 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 STK17BO94768 372 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 ABHD2P08910 425 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 TNFRSF8P28908 595 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 TAP2Q03519 686 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 ZIC1Q15915 447 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 CDHR3Q6ZTQ4 885 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 ZFAND4Q86XD8 727 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 CEP97Q8IW35 865 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 LRRC56Q8IYG6 542 aaPredicted RBP15.31■□□□□ 0.04
UPF3A-208ENST00000484246 OR2L3Q8NG85 312 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 MCOLN3Q8TDD5 553 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 CCDC138Q96M89 665 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.31■□□□□ 0.04
UPF3A-208ENST00000484246 ANKMY1Q9P2S6 941 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 ADAMTS6Q9UKP5 1117 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 NFU1Q9UMS0 254 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 PDE10AQ9Y233 779 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 MTO1Q9Y2Z2 717 aaKnown RBP15.31■□□□□ 0.04
UPF3A-208ENST00000484246 ADAMTS20P59510 1910 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 KIF26BQ2KJY2 2108 aa15.31■□□□□ 0.04
UPF3A-208ENST00000484246 TARM1B6A8C7 271 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 H3BMH7 237 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 RAD1O60671 282 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 RHOXF2BP0C7M4 288 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 MAGP20916 626 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 IMPA1P29218 277 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 CSRP3P50461 194 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 ATP1A2P50993 1020 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 COL9A2Q14055 689 aaPredicted RBP15.3■□□□□ 0.04
UPF3A-208ENST00000484246 FASTKQ14296 549 aaKnown RBP15.3■□□□□ 0.04
UPF3A-208ENST00000484246 USP10Q14694 798 aaKnown RBP15.3■□□□□ 0.04
UPF3A-208ENST00000484246 EFTUD2Q15029 972 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■■■□□ 15.3
UPF3A-208ENST00000484246 PHKG1Q16816 387 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 PPP1R3AQ16821 1122 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 SBSNQ6UWP8 590 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 CCDC91Q7Z6B0 441 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 DNAJC22Q8N4W6 341 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 SNRNP27Q8WVK2 155 aaKnown RBP15.3■□□□□ 0.04
UPF3A-208ENST00000484246 NKD1Q969G9 470 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 ZUFSPQ96AP4 578 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 LRFN5Q96NI6 719 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 RHOXF2Q9BQY4 288 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 TXLNGYQ9BZA5 131 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 DERL2Q9GZP9 239 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 GPAMQ9HCL2 828 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 FAM60AQ9NP50 221 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 BAHCC1Q9P281 2608 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 STOX2Q9P2F5 926 aaPredicted RBP15.3■□□□□ 0.04
UPF3A-208ENST00000484246 PCDHB3Q9Y5E6 796 aa15.3■□□□□ 0.04
UPF3A-208ENST00000484246 KLK10O43240 276 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 CCNDBP1O95273 360 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 STMN1P16949 149 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 ZNF28P17035 718 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 SLC26A3P40879 764 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 PGGT1BP53609 377 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 SLC12A2P55011 1212 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 RAB10P61026 200 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 ABATP80404 500 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 CDKL1Q00532 357 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms