RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 NDOR1Q9UHB4 597 aa17.29■□□□□ 0.36
ATG4B-221ENST00000483778 TSR3Q9UJK0 312 aaKnown RBP17.29■□□□□ 0.36
ATG4B-221ENST00000483778 RASGRF2O14827 1237 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 AGFG2O95081 481 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 C1orf105O95561 183 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 F7P08709 466 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 MGAT1P26572 445 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 TERF1P54274 439 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 MYBPC3Q14896 1274 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 SF1Q15637 639 aaKnown RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 CTSL3PQ5NE16 218 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 PTRHD1Q6GMV3 140 aaKnown RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 UNC5DQ6UXZ4 953 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 OVCH1Q7RTY7 1134 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 DCUN1D3Q8IWE4 304 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 TXLNBQ8N3L3 684 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 GALNT16Q8N428 558 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 CISD2Q8N5K1 135 aaKnown RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 METTL27Q8N6F8 245 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 PNPLA2Q96AD5 504 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 FAM136AQ96C01 138 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 SNRNP40Q96DI7 357 aaKnown RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 MFSD3Q96ES6 412 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 BIRC8Q96P09 236 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 TRIM56Q9BRZ2 755 aaKnown RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 MAP10Q9P2G4 905 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 TTC7AQ9ULT0 858 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 SRPK3Q9UPE1 567 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 DRG1Q9Y295 367 aaKnown RBP17.28■□□□□ 0.36
ATG4B-221ENST00000483778 CSAG2Q9Y5P2 127 aa17.28■□□□□ 0.36
ATG4B-221ENST00000483778 OR1D4P47884 311 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 FASTKQ14296 549 aaKnown RBP17.27■□□□□ 0.36
ATG4B-221ENST00000483778 CRB2Q5IJ48 1285 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 FHL5Q5TD97 284 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 VWA5B1Q5TIE3 1220 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 FRMPD2BQ6IN97 320 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 PEX13Q92968 403 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 FER1L6-AS2Q96M78 137 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 ZNF285Q96NJ3 590 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 MIPEPQ99797 713 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 SYNPO2LQ9H987 977 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 ASF1BQ9NVP2 202 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 SYBUQ9NX95 663 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 ANAPC5Q9UJX4 755 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 NTNG1Q9Y2I2 539 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 CENPEQ02224 2701 aa17.27■□□□□ 0.36
ATG4B-221ENST00000483778 NBPF19A0A087WUL8 3843 aa17.27■□□□□ 0.35
ATG4B-221ENST00000483778 LOC105369274A0A096LPK9 316 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 LOC102723532A0A0G2JNH3 316 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 A0A1W2PPV9 198 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 PEX12O00623 359 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 SOCS6O14544 535 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 AVILO75366 819 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 VAPBO95292 243 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 ONECUT2O95948 504 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 S1PR4O95977 384 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 FMO4P31512 558 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 NPY2RP49146 381 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 TTPAP49638 278 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 EIF3BP55884 814 aaKnown RBP17.26■□□□□ 0.35
ATG4B-221ENST00000483778 BASP1P80723 227 aaKnown RBP17.26■□□□□ 0.35
ATG4B-221ENST00000483778 NKG7Q16617 165 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 OR4N4Q8N0Y3 316 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 IP6K3Q96PC2 410 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 C17orf62Q9BQA9 187 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 SLC6A20Q9NP91 592 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 LZTFL1Q9NQ48 299 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 EIF2B3Q9NR50 452 aaKnown RBP17.26■□□□□ 0.35
ATG4B-221ENST00000483778 CUTCQ9NTM9 273 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 C5AR2Q9P296 337 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 CTSFQ9UBX1 484 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 FBXL4Q9UKA2 621 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 SLC39A10Q9ULF5 831 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 MAU2Q9Y6X3 613 aa17.26■□□□□ 0.35
ATG4B-221ENST00000483778 DIDO1Q9BTC0 2240 aaKnown RBP17.26■□□□□ 0.35
ATG4B-221ENST00000483778 SCN3AQ9NY46 2000 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 A0A1B0GX78 115 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 F8W8V4 182 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 AGPSO00116 658 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 DSCR3O14972 297 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 NIPSNAP2O75323 286 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 NDUFS3O75489 264 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 CXCR5P32302 372 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 PPARGP37231 505 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-221ENST00000483778 SOX8P57073 446 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 VSX2P58304 361 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-221ENST00000483778 TRIP13Q15645 432 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-221ENST00000483778 C4orf17Q53FE4 359 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 AARS2Q5JTZ9 985 aaKnown RBP17.25■□□□□ 0.35
ATG4B-221ENST00000483778 WASHC2DQ5SRD0 308 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 DRICH1Q6PGQ1 229 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-221ENST00000483778 CNSTQ6PJW8 725 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 KIRREL2Q6UWL6 708 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 IGFL3Q6UXB1 125 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 MPP5Q8N3R9 675 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 AMER2Q8N7J2 671 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 CLEC1AQ8NC01 280 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 OR2A1Q8NGT9 310 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 PRR7Q8TB68 274 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms