RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 HPS6Q86YV9 775 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 WFDC3Q8IUB2 231 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 TMEM126BQ8IUX1 230 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 CARFQ8N187 725 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 D2HGDHQ8N465 521 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ANKS4BQ8N8V4 417 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 RAPGEF5Q92565 580 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 MR1Q95460 341 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ALPK1Q96QP1 1244 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 MAP3K3Q99759 626 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 TUBB2BQ9BVA1 445 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 FANCEQ9HB96 536 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 BPIFA1Q9NP55 256 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 SLC6A20Q9NP91 592 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 SLAMF7Q9NQ25 335 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 KCND1Q9NSA2 647 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 HRASLS2Q9NWW9 162 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 SOHLH2Q9NX45 425 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 SLC5A6Q9Y289 635 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 WDR37Q9Y2I8 494 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 LUC7L2Q9Y383 392 aaKnown RBP5.72□□□□□ -1.49
CSDE1-207ENST00000483407 NBASA2RRP1 2371 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 GLYATL1P3A0A0U1RQE8 302 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 KLHL33A6NCF5 533 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 OR5K3A6NET4 321 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 ENO4A6NNW6 628 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 MATN2O00339 956 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 PMPCBO75439 489 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 POP7O75817 140 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SORBS2O94875 1100 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 TMEM63AO94886 807 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 MT-CYBP00156 380 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 MTHFD1P11586 935 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 COL6A2P12110 1019 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 MSH3P20585 1137 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 NDUFS1P28331 727 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SPAM1P38567 509 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 ANP32AP39687 249 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 RRADP55042 308 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 UBASH3AP57075 661 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SESN3P58005 492 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 PPP1CAP62136 330 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 RPS18P62269 152 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CHAF1BQ13112 559 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 PRKAA1Q13131 559 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 KRT33BQ14525 404 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 MESDQ14696 234 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 INPP5JQ15735 1006 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 NADK2Q4G0N4 442 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 KHDC1Q4VXA5 237 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 TEX44Q53QW1 395 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 IZUMO3Q5VZ72 239 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 PAPD7Q5XG87 772 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CPZQ66K79 652 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SLC9A4Q6AI14 798 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 FAM199XQ6PEV8 388 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 TMEM220Q6QAJ8 160 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CEP128Q6ZU80 1094 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 RFX6Q8HWS3 928 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 RHOT1Q8IXI2 618 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 TTC30BQ8N4P2 665 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 PLD5Q8N7P1 536 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 GPR150Q8NGU9 434 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SPATA22Q8NHS9 363 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 DTX3LQ8TDB6 740 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 ZFPM2Q8WW38 1151 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CPT1BQ92523 772 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 TADA1Q96BN2 335 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CLIP3Q96DZ5 547 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 LRFN5Q96NI6 719 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 RUFY1Q96T51 708 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SLC7A5P2Q9GIP4 190 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CHST8Q9H2A9 424 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 DEF6Q9H4E7 631 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 AKIRIN1Q9H9L7 192 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 GLOD4Q9HC38 313 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SYTL2Q9HCH5 934 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 MLXIPLQ9NP71 852 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 IL26Q9NPH9 171 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CASS4Q9NQ75 786 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 IMP3Q9NV31 184 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 HACD3Q9P035 362 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 H2AFY2Q9P0M6 372 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SLAMF8Q9P0V8 285 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 FAM153AQ9UHL3 310 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 TMPRSS11EQ9UL52 423 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CAPN11Q9UMQ6 739 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SNX7Q9UNH6 387 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 PSMD13Q9UNM6 376 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 COA3Q9Y2R0 106 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 PKP3Q9Y446 797 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 SPO11Q9Y5K1 396 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 CFAP20Q9Y6A4 193 aaKnown RBP5.71□□□□□ -1.5
CSDE1-207ENST00000483407 COLEC10Q9Y6Z7 277 aa5.71□□□□□ -1.5
CSDE1-207ENST00000483407 LRRK2Q5S007 2527 aa5.7□□□□□ -1.5
CSDE1-207ENST00000483407 A1L4Q6 167 aa5.7□□□□□ -1.5
CSDE1-207ENST00000483407 OR6C74A6NCV1 312 aa5.7□□□□□ -1.5
CSDE1-207ENST00000483407 MGAT4DA6NG13 374 aa5.7□□□□□ -1.5
CSDE1-207ENST00000483407 OR2AG2A6NM03 316 aa5.7□□□□□ -1.5
CSDE1-207ENST00000483407 NOTOA8MTQ0 251 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms