RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
USP40-213ENST00000483216 IDI1Q13907 227 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 CEP85LQ5SZL2 805 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 FAM53AQ6NSI3 398 aaPredicted RBP5.41□□□□□ -1.54
USP40-213ENST00000483216 ARHGAP11AQ6P4F7 1023 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 ZNF554Q86TJ5 538 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 SCML4Q8N228 414 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 FBXO39Q8N4B4 442 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 WDSUB1Q8N9V3 476 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 KIF18AQ8NI77 898 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 RNF128Q8TEB7 428 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 HSD17B8Q92506 261 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 LPGAT1Q92604 370 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 ERO1AQ96HE7 468 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 MYADMQ96S97 322 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 RTP3Q9BQQ7 232 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 BTBD10Q9BSF8 475 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 MXD3Q9BW11 206 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 BARHL1Q9BZE3 327 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 VN1R1Q9GZP7 353 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 C2orf42Q9NWW7 574 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 TULP4Q9NRJ4 1543 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 EVC2Q86UK5 1308 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 RAD50Q92878 1312 aa5.41□□□□□ -1.54
USP40-213ENST00000483216 SSH2Q76I76 1423 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 SMCHD1A6NHR9 2005 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 A6NL46 340 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 AHCYL1O43865 530 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 TSPAN1O60635 241 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 ZG16O60844 167 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 PLA2G4BP0C869 781 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 GABRA5P31644 462 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 GNB1P62873 340 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 LGALS3BPQ08380 585 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 TRDNQ13061 729 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 TUBB2AQ13885 445 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 TEX38Q6PEX7 206 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 CORO6Q6QEF8 472 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 C15orf39Q6ZRI6 1047 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 CCDC91Q7Z6B0 441 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 ISCA2Q86U28 154 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 APPL2Q8NEU8 664 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 KIAA1524Q8TCG1 905 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 TMCO6Q96DC7 493 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 FSD1Q9BTV5 496 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 LMF2Q9BU23 707 aaKnown RBP5.4□□□□□ -1.54
USP40-213ENST00000483216 TUBB2BQ9BVA1 445 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 NAT10Q9H0A0 1025 aaKnown RBP5.4□□□□□ -1.54
USP40-213ENST00000483216 ARRDC1-AS1Q9H2J1 176 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 SIX2Q9NPC8 291 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 OSER1Q9NX31 292 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 OSGIN1Q9UJX0 560 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 KCNJ14Q9UNX9 436 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 RABGAP1Q9Y3P9 1069 aa5.4□□□□□ -1.54
USP40-213ENST00000483216 PASKQ96RG2 1323 aa5.4□□□□□ -1.55
USP40-213ENST00000483216 SPATA31D1Q6ZQQ2 1576 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 SYCE3A1L190 88 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 GOLGA6L4A6NEF3 574 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 A8MV72 311 aaPredicted RBP5.39□□□□□ -1.55
USP40-213ENST00000483216 PLOD2O00469 737 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 CTAGE5O15320 804 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 GAS8-AS1O95177 125 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 BCL10O95999 233 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 CD48P09326 243 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 GNB3P16520 340 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 SLC6A6P31641 620 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 ATP12AP54707 1039 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 CDH11P55287 796 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 LEKR1Q6ZMV7 388 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 DNAAF5Q86Y56 855 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 OR10S1Q8NGN2 331 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 OR1J1Q8NGS3 322 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 EXD1Q8NHP7 514 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 MS4A10Q96PG2 267 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 MYCBPQ99417 103 aaPredicted RBP5.39□□□□□ -1.55
USP40-213ENST00000483216 FNDC11Q9BVV2 318 aa5.39□□□□□ -1.55
USP40-213ENST00000483216 CHORDC1Q9UHD1 332 aaPredicted RBP5.39□□□□□ -1.55
USP40-213ENST00000483216 CLTCQ00610 1675 aaKnown RBP5.39□□□□□ -1.55
USP40-213ENST00000483216 ALKQ9UM73 1620 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 SHPRHQ149N8 1683 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 ANKUB1A6NFN9 424 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 HHLA1C9JL84 531 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 OR10H2O60403 315 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 ADCY5O95622 1261 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 CLPTM1O96005 669 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 APOHP02749 345 aaPredicted RBP5.38□□□□□ -1.55
USP40-213ENST00000483216 FRMD6-AS1P0C7T7 363 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 NNMTP40261 264 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 PTPN14Q15678 1187 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 TMEM173Q86WV6 379 aaPredicted RBP5.38□□□□□ -1.55
USP40-213ENST00000483216 CEP57L1Q8IYX8 460 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 SYT2Q8N9I0 419 aaPredicted RBP5.38□□□□□ -1.55
USP40-213ENST00000483216 OR5M8Q8NGP6 311 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 GRHL3Q8TE85 626 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 ZFAND2BQ8WV99 257 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 LRR1Q96L50 414 aa5.38□□□□□ -1.55
USP40-213ENST00000483216 TRAF4Q9BUZ4 470 aaPredicted RBP5.38□□□□□ -1.55
USP40-213ENST00000483216 ZNF701Q9NV72 531 aaPredicted RBP5.38□□□□□ -1.55
USP40-213ENST00000483216 GDE1Q9NZC3 331 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms