RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 KIF5BP33176 963 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 DUTP33316 252 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 SOAT1P35610 550 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 TMPOP42166 694 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 CDX1P47902 265 aaPredicted RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 PCYT1AP49585 367 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 HTR6P50406 440 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 SMSP52788 366 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 POLR2FP61218 127 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 ROR2Q01974 943 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 GCNT1Q02742 428 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 RELQ04864 619 aaPredicted RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 ETFDHQ16134 617 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 TWISTNBQ3B726 338 aaPredicted RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 TDRD12Q587J7 1177 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 XKR3Q5GH77 459 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 OR7E24Q6IFN5 339 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 GALNT17Q6IS24 598 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 CASC4Q6P4E1 433 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 CATSPER4Q7RTX7 472 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 FJX1Q86VR8 437 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 CTAGE4Q8IX94 777 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 CFAP206Q8IYR0 622 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 RNF113BQ8IZP6 322 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 ZNF843Q8N446 348 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 RBMXL3Q8N7X1 1067 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 L3MBTL4Q8NA19 623 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 OR14A16Q8NHC5 309 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 TMED6Q8WW62 240 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 IRGQQ8WZA9 623 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 PROX1Q92786 737 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 MRPL38Q96DV4 380 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 MTERF3Q96E29 417 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 FAM71F1Q96KD3 344 aaPredicted RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 FAM20AQ96MK3 541 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 MYADMQ96S97 322 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 TM6SF1Q9BZW5 370 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 S1PR5Q9H228 398 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 HSD3B7Q9H2F3 369 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 LIN28AQ9H9Z2 209 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 PDRG1Q9NUG6 133 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 SPG21Q9NZD8 308 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 TBK1Q9UHD2 729 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 DAPK2Q9UIK4 370 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 RALYQ9UKM9 306 aaKnown RBP3.41□□□□□ -1.86
CLCC1-209ENST00000482889 FBXW2Q9UKT8 454 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 GPR132Q9UNW8 380 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 KCNK6Q9Y257 313 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 KLK4Q9Y5K2 254 aa3.41□□□□□ -1.86
CLCC1-209ENST00000482889 DNAJC9-AS1A6NH13 148 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 TRIM64CA6NLI5 447 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 HMMRO75330 724 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 GLCEO94923 617 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 LETM1O95202 739 aaPredicted RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 CXCL14O95715 111 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 PMS2P2O95744 297 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 PTBP3O95758 552 aaKnown RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 SYF2O95926 243 aaKnown RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 SERPING1P05155 500 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 CKMT2P17540 419 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 TYMPP19971 482 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 MAPK3P27361 379 aaPredicted RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 NT5C2P49902 561 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 LUMP51884 338 aaPredicted RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 GFPT1Q06210 699 aaPredicted RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 GTF2H2Q13888 395 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 ZNF234Q14588 700 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 NONOQ15233 471 aaKnown RBP eCLIP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 PTPN14Q15678 1187 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 NPTX1Q15818 432 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 EZH2Q15910 746 aaKnown RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 FAM174BQ3ZCQ3 159 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 TMEM35AQ53FP2 167 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 MORN5Q5VZ52 161 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 ZNF770Q6IQ21 691 aaPredicted RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 GTF2H2CQ6P1K8 395 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 FAM171BQ6P995 826 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 UNC5DQ6UXZ4 953 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 CCNI2Q6ZMN8 369 aaPredicted RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 MCM10Q7L590 875 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 PRSS42Q7Z5A4 293 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 ASPGQ86U10 573 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 LCA5Q86VQ0 697 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 ERC1Q8IUD2 1116 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 PELI3Q8N2H9 469 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 ARL6IP6Q8N6S5 226 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 ZNF441Q8N8Z8 693 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 KIAA0895Q8NCT3 520 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 URGCPQ8TCY9 931 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 THOC1Q96FV9 657 aaKnown RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 GDAP1L1Q96MZ0 367 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 TSGA13Q96PP4 275 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 GAL3ST4Q96RP7 486 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 NDNQ99608 321 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 SPXQ9BT56 116 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 TRAF4Q9BUZ4 470 aaPredicted RBP3.4□□□□□ -1.87
CLCC1-209ENST00000482889 SNX25Q9H3E2 840 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 GAREM1Q9H706 876 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 SLCO1C1Q9NYB5 712 aa3.4□□□□□ -1.87
CLCC1-209ENST00000482889 TRPC4Q9UBN4 977 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms