RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ALPPP05187 535 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 TERF1P54274 439 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 ARSFP54793 590 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 SIX1Q15475 284 aaPredicted RBP14.64□□□□□ -0.07
LIMS3-203ENST00000480744 KCTD19Q17RG1 926 aaPredicted RBP14.64□□□□□ -0.07
LIMS3-203ENST00000480744 FCRL6Q6DN72 434 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 MRPL14Q6P1L8 145 aaKnown RBP14.64□□□□□ -0.07
LIMS3-203ENST00000480744 FIGLAQ6QHK4 219 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 CES3Q6UWW8 571 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 OTOAQ7RTW8 1153 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 PPP1R32Q7Z5V6 425 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 LRRC8AQ8IWT6 810 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 GALNT16Q8N428 558 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 PSMG3-AS1Q96PY0 264 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 SLC29A3Q9BZD2 475 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 IL22Q9GZX6 179 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 P2RY12Q9H244 342 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 LZTFL1Q9NQ48 299 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 TREX1Q9NSU2 369 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 C5AR2Q9P296 337 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 TTC7AQ9ULT0 858 aaPredicted RBP14.64□□□□□ -0.07
LIMS3-203ENST00000480744 NFS1Q9Y697 457 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 A0A1B0GX78 115 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 KRT87PA6NCN2 255 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 UMODP07911 640 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 MCM3P25205 808 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 MGAT1P26572 445 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 KCNJ1P48048 391 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 NPY2RP49146 381 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 MYBPC3Q14896 1274 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 CCSMST1Q4G0I0 132 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 ZC3H12BQ5HYM0 836 aaKnown RBP14.63□□□□□ -0.07
LIMS3-203ENST00000480744 CNSTQ6PJW8 725 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 MPP5Q8N3R9 675 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 RAB42Q8N4Z0 105 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 METTL27Q8N6F8 245 aaPredicted RBP14.63□□□□□ -0.07
LIMS3-203ENST00000480744 TTC29Q8NA56 475 aaPredicted RBP14.63□□□□□ -0.07
LIMS3-203ENST00000480744 UBE2Q2Q8WVN8 375 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 RAD51AP1Q96B01 352 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 SELENOSQ9BQE4 189 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 RAB11FIP5Q9BXF6 653 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 SLC22A11Q9NSA0 550 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 CUTCQ9NTM9 273 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 SYBUQ9NX95 663 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 CDC23Q9UJX2 597 aa14.63□□□□□ -0.07
LIMS3-203ENST00000480744 DRG1Q9Y295 367 aaKnown RBP14.63□□□□□ -0.07
LIMS3-203ENST00000480744 TCP11X1B4DZS4 312 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 GOLGA8KD6RF30 607 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 GOLGA8TH3BQL2 631 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 AP3B1O00203 1094 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 DSCR3O14972 297 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 KPNA5O15131 536 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 ALOX12BO75342 701 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 VAPBO95292 243 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 C1orf105O95561 183 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 FGGP02679 453 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 PIM1P11309 404 aaPredicted RBP14.62□□□□□ -0.07
LIMS3-203ENST00000480744 ITGAXP20702 1163 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 RPS3P23396 243 aaKnown RBP eCLIP14.62□□□□□ -0.07
LIMS3-203ENST00000480744 PSMB5P28074 263 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 FMO4P31512 558 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 MRPL49Q13405 166 aaKnown RBP14.62□□□□□ -0.07
LIMS3-203ENST00000480744 GRM7Q14831 915 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 PLEKHN1Q494U1 663 aaPredicted RBP14.62□□□□□ -0.07
LIMS3-203ENST00000480744 C4orf22Q6V702 233 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 SHISA6Q6ZSJ9 500 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 SDCCAG8Q86SQ7 713 aaPredicted RBP14.62□□□□□ -0.07
LIMS3-203ENST00000480744 LRRC6Q86X45 466 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 IQCKQ8N0W5 287 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 DENND1AQ8TEH3 1009 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.62□□□□□ -0.07
LIMS3-203ENST00000480744 MAIP1Q8WWC4 291 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 FAM136AQ96C01 138 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 C19orf60Q96EN9 201 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 FOPNLQ96NB1 174 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 MIPEPQ99797 713 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 ILKAPQ9H0C8 392 aaPredicted RBP14.62□□□□□ -0.07
LIMS3-203ENST00000480744 ATP13A2Q9NQ11 1180 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 MRFAP1Q9Y605 127 aa14.62□□□□□ -0.07
LIMS3-203ENST00000480744 HEATR5BQ9P2D3 2071 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 HIVEP3Q5T1R4 2406 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 AGPSO00116 658 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 CEP104O60308 925 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 KLHL41O60662 606 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 NIPSNAP2O75323 286 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 SEMA7AO75326 666 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 ITGA3P26006 1051 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 VARSP26640 1264 aaKnown RBP14.61□□□□□ -0.07
LIMS3-203ENST00000480744 GCGRP47871 477 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 VSX2P58304 361 aaPredicted RBP14.61□□□□□ -0.07
LIMS3-203ENST00000480744 TRIP13Q15645 432 aaPredicted RBP14.61□□□□□ -0.07
LIMS3-203ENST00000480744 EIF2S3LQ2VIR3 472 aaKnown RBP14.61□□□□□ -0.07
LIMS3-203ENST00000480744 TCTE1Q5JU00 501 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 CTSL3PQ5NE16 218 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 MRNIPQ6NTE8 343 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 DRICH1Q6PGQ1 229 aaPredicted RBP14.61□□□□□ -0.07
LIMS3-203ENST00000480744 OVCH1Q7RTY7 1134 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 PRR7Q8TB68 274 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 TM9SF4Q92544 642 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 FKBP10Q96AY3 582 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms