RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 COILP38432 576 aaPredicted RBP11.01□□□□□ -0.65
CCM2-213ENST00000480658 KCNJ1P48048 391 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 CRADDP78560 199 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 RELAQ04206 551 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 IL10RAQ13651 578 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 LONRF1Q17RB8 773 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 NKAIN1Q4KMZ8 207 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 IRAK1BP1Q5VVH5 260 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 ZNF385CQ66K41 422 aaPredicted RBP11.01□□□□□ -0.65
CCM2-213ENST00000480658 ZNF470Q6ECI4 717 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 PRMT9Q6P2P2 845 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 FBXO38Q6PIJ6 1188 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 SYDE1Q6ZW31 735 aaPredicted RBP11.01□□□□□ -0.65
CCM2-213ENST00000480658 TMEM135Q86UB9 458 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 ZNF655Q8N720 491 aaPredicted RBP11.01□□□□□ -0.65
CCM2-213ENST00000480658 LINC01555Q8NAE3 123 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 FBXO15Q8NCQ5 510 aaPredicted RBP11.01□□□□□ -0.65
CCM2-213ENST00000480658 FLVCR1-AS1Q8TAF5 88 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 SLCO2A1Q92959 643 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 MVB12AQ96EY5 273 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 PPM1MQ96MI6 270 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 BIRC8Q96P09 236 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 SERPINB12Q96P63 405 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 SELENOSQ9BQE4 189 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 MENTQ9BUN1 341 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 MLXIPLQ9NP71 852 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 SPHK1Q9NYA1 384 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 GPR83Q9NYM4 423 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 MARCH4Q9P2E8 410 aaPredicted RBP11.01□□□□□ -0.65
CCM2-213ENST00000480658 BOD1L1Q8NFC6 3051 aa11□□□□□ -0.65
CCM2-213ENST00000480658 FITM1A5D6W6 292 aa11□□□□□ -0.65
CCM2-213ENST00000480658 ARGFXA6NJG6 315 aa11□□□□□ -0.65
CCM2-213ENST00000480658 IQCF5A8MTL0 148 aa11□□□□□ -0.65
CCM2-213ENST00000480658 H3BMH7 237 aa11□□□□□ -0.65
CCM2-213ENST00000480658 MYO1CO00159 1063 aa11□□□□□ -0.65
CCM2-213ENST00000480658 DSCR3O14972 297 aa11□□□□□ -0.65
CCM2-213ENST00000480658 ONECUT2O95948 504 aa11□□□□□ -0.65
CCM2-213ENST00000480658 FURINP09958 794 aa11□□□□□ -0.65
CCM2-213ENST00000480658 ERGP11308 486 aa11□□□□□ -0.65
CCM2-213ENST00000480658 PGAM1P18669 254 aa11□□□□□ -0.65
CCM2-213ENST00000480658 HRH2P25021 359 aa11□□□□□ -0.65
CCM2-213ENST00000480658 ARNTP27540 789 aa11□□□□□ -0.65
CCM2-213ENST00000480658 FMO4P31512 558 aa11□□□□□ -0.65
CCM2-213ENST00000480658 SKIV2L2P42285 1042 aaKnown RBP11□□□□□ -0.65
CCM2-213ENST00000480658 GABRA4P48169 554 aa11□□□□□ -0.65
CCM2-213ENST00000480658 CARSP49589 748 aaKnown RBP11□□□□□ -0.65
CCM2-213ENST00000480658 VPS41P49754 854 aa11□□□□□ -0.65
CCM2-213ENST00000480658 RGS4P49798 205 aa11□□□□□ -0.65
CCM2-213ENST00000480658 RPS18P62269 152 aaKnown RBP11□□□□□ -0.65
CCM2-213ENST00000480658 AP2B1P63010 937 aa11□□□□□ -0.65
CCM2-213ENST00000480658 ABATP80404 500 aa11□□□□□ -0.65
CCM2-213ENST00000480658 FOXK1P85037 733 aa11□□□□□ -0.65
CCM2-213ENST00000480658 GBX1Q14549 363 aa11□□□□□ -0.65
CCM2-213ENST00000480658 CYP2A13Q16696 494 aa11□□□□□ -0.65
CCM2-213ENST00000480658 VWA5B1Q5TIE3 1220 aa11□□□□□ -0.65
CCM2-213ENST00000480658 CNSTQ6PJW8 725 aa11□□□□□ -0.65
CCM2-213ENST00000480658 KIAA0408Q6ZU52 694 aa11□□□□□ -0.65
CCM2-213ENST00000480658 PRUNE1Q86TP1 453 aa11□□□□□ -0.65
CCM2-213ENST00000480658 LDB1Q86U70 411 aaPredicted RBP11□□□□□ -0.65
CCM2-213ENST00000480658 VRK3Q8IV63 474 aa11□□□□□ -0.65
CCM2-213ENST00000480658 MCATQ8IVS2 390 aaKnown RBP11□□□□□ -0.65
CCM2-213ENST00000480658 PALM2Q8IXS6 379 aa11□□□□□ -0.65
CCM2-213ENST00000480658 KRT222Q8N1A0 295 aa11□□□□□ -0.65
CCM2-213ENST00000480658 OR9A1PQ8NGU1 263 aa11□□□□□ -0.65
CCM2-213ENST00000480658 SMPDL3AQ92484 453 aa11□□□□□ -0.65
CCM2-213ENST00000480658 ZNF669Q96BR6 464 aaPredicted RBP11□□□□□ -0.65
CCM2-213ENST00000480658 OSBPL9Q96SU4 736 aa11□□□□□ -0.65
CCM2-213ENST00000480658 SLC29A3Q9BZD2 475 aa11□□□□□ -0.65
CCM2-213ENST00000480658 FAM129AQ9BZQ8 928 aa11□□□□□ -0.65
CCM2-213ENST00000480658 PCBD2Q9H0N5 130 aa11□□□□□ -0.65
CCM2-213ENST00000480658 SLC26A1Q9H2B4 701 aa11□□□□□ -0.65
CCM2-213ENST00000480658 GRPEL1Q9HAV7 217 aa11□□□□□ -0.65
CCM2-213ENST00000480658 FAM60AQ9NP50 221 aa11□□□□□ -0.65
CCM2-213ENST00000480658 PLAGL1Q9UM63 463 aa11□□□□□ -0.65
CCM2-213ENST00000480658 CDC14AQ9UNH5 594 aa11□□□□□ -0.65
CCM2-213ENST00000480658 SPTA1P02549 2419 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 ZBTB14O43829 449 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 VPS4BO75351 444 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 PSIP1O75475 530 aaKnown RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 KLF7O75840 302 aaPredicted RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 CAPN1P07384 714 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 MPC1LP0DKB6 136 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 EZRP15311 586 aaKnown RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 ALAS2P22557 587 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 CCND1P24385 295 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 PEBP1P30086 187 aaKnown RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 RPA3P35244 121 aaPredicted RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 PTGIRP43119 386 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 MAGEA3P43357 314 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 CD97P48960 835 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 NFKB2Q00653 900 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 SP140Q13342 867 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 TRIP13Q15645 432 aaPredicted RBP10.99□□□□□ -0.65
CCM2-213ENST00000480658 ZIC1Q15915 447 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 MUM1Q2TAK8 710 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 DEFB110Q30KQ9 67 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 PTCHD3Q3KNS1 767 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 CTSL3PQ5NE16 218 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 GARNL3Q5VVW2 1013 aa10.99□□□□□ -0.65
CCM2-213ENST00000480658 MLIPQ5VWP3 458 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms