RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CAPN10Q9HC96 672 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 SLC40A1Q9NP59 571 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 NPHS2Q9NP85 383 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 POT1Q9NUX5 634 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 ICKQ9UPZ9 632 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 TRAF6Q9Y4K3 522 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 CSNK1G3Q9Y6M4 447 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 TMEM131Q92545 1883 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 A0A1B0GTQ1 180 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 GIPC1O14908 333 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 KATNA1O75449 491 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 OR4F21O95013 312 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 EPN2O95208 641 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 OTCP00480 354 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 TROVE2P10155 538 aaKnown RBP eCLIP17.02■□□□□ 0.32
UPF3A-206ENST00000480362 EPORP19235 508 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 ARL1P40616 181 aaPredicted RBP17.02■□□□□ 0.32
UPF3A-206ENST00000480362 RAB28P51157 221 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 PKNOX1P55347 436 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 ERVPABLB-1P60509 514 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 CDC16Q13042 620 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 TERF2Q15554 542 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 TRIM61Q5EBN2 209 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 ZC3H14Q6PJT7 736 aaKnown RBP17.02■□□□□ 0.32
UPF3A-206ENST00000480362 MILR1Q7Z6M3 343 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 PIGWQ7Z7B1 504 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 WDR75Q8IWA0 830 aaKnown RBP17.02■□□□□ 0.32
UPF3A-206ENST00000480362 SLC25A45Q8N413 288 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 OR4E2Q8NGC2 313 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 OR2L8Q8NGY9 312 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 MAPK15Q8TD08 544 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 ZNF473Q8WTR7 871 aaKnown RBP17.02■□□□□ 0.32
UPF3A-206ENST00000480362 SETD7Q8WTS6 366 aaKnown RBP17.02■□□□□ 0.32
UPF3A-206ENST00000480362 LCN9Q8WX39 176 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 SMPDL3AQ92484 453 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 CDK15Q96Q40 435 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 OR4K3Q96R72 315 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 NTMT1Q9BV86 223 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 RAB11FIP5Q9BXF6 653 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 ARRDC1-AS1Q9H2J1 176 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 CCDC177Q9NQR7 707 aaPredicted RBP17.02■□□□□ 0.32
UPF3A-206ENST00000480362 ZNF225Q9UK10 706 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 RAB23Q9ULC3 237 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 STK38LQ9Y2H1 464 aa17.02■□□□□ 0.32
UPF3A-206ENST00000480362 SDK1Q7Z5N4 2213 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 TTC28Q96AY4 2481 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 TMEM233B4DJY2 109 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 NDUFAB1O14561 156 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 NOBOXO60393 691 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 DFNA5O60443 496 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 SNX3O60493 162 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 ESRRBO95718 433 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 FGF4P08620 206 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 NPPBP16860 134 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 CCND1P24385 295 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 GABPB1Q06547 395 aaPredicted RBP17.01■□□□□ 0.31
UPF3A-206ENST00000480362 TRAF3Q13114 568 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 GPR18Q14330 331 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 THEMIS2Q5TEJ8 643 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 OGFOD3Q6PK18 319 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 IL27RAQ6UWB1 636 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 SPATA21Q7Z572 469 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 CLYBLQ8N0X4 340 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 DCBLD1Q8N8Z6 715 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 LINC01555Q8NAE3 123 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 OR4F6Q8NGB9 312 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 RFWD2Q8NHY2 731 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 HMGCLL1Q8TB92 370 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 SH3KBP1Q96B97 665 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 MIPEPQ99797 713 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 GAREM1Q9H706 876 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 IL21RQ9HBE5 538 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 KLHL14Q9P2G3 628 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 FIS1Q9Y3D6 152 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 KCNE2Q9Y6J6 123 aa17.01■□□□□ 0.31
UPF3A-206ENST00000480362 ARHGEF17Q96PE2 2063 aaPredicted RBP17■□□□□ 0.31
UPF3A-206ENST00000480362 A0A1W2PPV9 198 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 ARHGAP33O14559 1287 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 CLGNO14967 610 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 AZIN1O14977 448 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 CRCPO75575 148 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 EBLN1P0CF75 366 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 EPHA8P29322 1005 aaPredicted RBP17■□□□□ 0.31
UPF3A-206ENST00000480362 SHMT2P34897 504 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 MPLP40238 635 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 HK2P52789 917 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 FOXA1P55317 472 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 MAZP56270 477 aaKnown RBP17■□□□□ 0.31
UPF3A-206ENST00000480362 HHEXQ03014 270 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 PLCL1Q15111 1095 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 CCDC6Q16204 474 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 PRAMEF13Q5VWM6 474 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 FAM219BQ5XKK7 198 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 CLEC6AQ6EIG7 209 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 LETMD1Q6P1Q0 360 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 LCTLQ6UWM7 567 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 AMIGO1Q86WK6 493 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 KIRREL3Q8IZU9 778 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 ARL14Q8N4G2 192 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 AFAP1L2Q8N4X5 818 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms