RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	SRP72	O76094	671 aa	Known RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	PRAMEF1	O95521	474 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	ZNF7	P17097	686 aa	Predicted RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	TSFM	P43897	325 aa	Known RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	PDIA2	Q13087	525 aa	Known RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	FRG1	Q14331	258 aa	Known RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	NCF4	Q15080	339 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	ZNF630	Q2M218	657 aa	Predicted RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	SPANXN3	Q5MJ09	141 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	DCAF10	Q5QP82	559 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	TMTC4	Q5T4D3	741 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	KIAA0930	Q6ICG6	404 aa	Predicted RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	MRNIP	Q6NTE8	343 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	MRGPRE	Q86SM8	312 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	PALM2	Q8IXS6	379 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	CNPY4	Q8N129	248 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	GPR26	Q8NDV2	337 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	GRHL3	Q8TE85	626 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	PPP4R1	Q8TF05	950 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	EID2B	Q96D98	161 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	DNAJC1	Q96KC8	554 aa	Known RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	SIGLEC10	Q96LC7	697 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	TTC25	Q96NG3	672 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	SMIM14	Q96QK8	99 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	FMO2	Q99518	471 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	WDR77	Q9BQA1	342 aa	Predicted RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	DPH2	Q9BQC3	489 aa	Predicted RBP	15.06	■□□□□ 0
HDLBP-238	ENST00000479894	DHRS4	Q9BTZ2	278 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	SMOX	Q9NWM0	555 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	SLC23A2	Q9UGH3	650 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	CRLS1	Q9UJA2	301 aa		15.06	■□□□□ 0
HDLBP-238	ENST00000479894	KLHL33	A6NCF5	533 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	OR52A4P	A6NMU1	304 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	BHMG1	C9JSJ3	638 aa	Predicted RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	SLC25A14	O95258	325 aa	Predicted RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	ZBTB11	O95625	1053 aa	Predicted RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	IDS	P22304	550 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	SSTR2	P30874	369 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	CA5A	P35218	305 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	DHX9	Q08211	1270 aa	Known RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	THOC5	Q13769	683 aa	Known RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	SSPN	Q14714	243 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	PLCL1	Q15111	1095 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	SEPT7	Q16181	437 aa	Known RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	LONRF1	Q17RB8	773 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	ANKRD20A4	Q4UJ75	823 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	FASTKD1	Q53R41	847 aa	Known RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	FNBP1L	Q5T0N5	605 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	FAM69B	Q5VUD6	431 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	ALS2CL	Q60I27	953 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	FCRL6	Q6DN72	434 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	FAM151B	Q6UXP7	276 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	LRRTM4	Q86VH4	590 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	SYTL1	Q8IYJ3	562 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	ZBED8	Q8IZ13	594 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	OR4L1	Q8NH43	312 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	GDAP1	Q8TB36	358 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	ITLN2	Q8WWU7	325 aa	Predicted RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	GLYATL1	Q969I3	302 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	DCUN1D1	Q96GG9	259 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	TCF12	Q99081	682 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	OR2AG1	Q9H205	316 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	ASB8	Q9H765	288 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	TREX1	Q9NSU2	369 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	FKBPL	Q9UIM3	349 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	NOVA2	Q9UNW9	492 aa	Known RBP	15.05	■□□□□ -0
HDLBP-238	ENST00000479894	BTRC	Q9Y297	605 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	FAM169A	Q9Y6X4	670 aa		15.05	■□□□□ -0
HDLBP-238	ENST00000479894	NCOA6	Q14686	2063 aa	Predicted RBP	15.04	■□□□□ -0
HDLBP-238	ENST00000479894	UBA6	A0AVT1	1052 aa	Predicted RBP	15.04	■□□□□ -0
HDLBP-238	ENST00000479894	ESYT3	A0FGR9	886 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	QSOX1	O00391	747 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	BUD23	O43709	281 aa	Known RBP	15.04	■□□□□ -0
HDLBP-238	ENST00000479894	RPL10	P27635	214 aa	Known RBP	15.04	■□□□□ -0
HDLBP-238	ENST00000479894	HTR1E	P28566	365 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	MC4R	P32245	332 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	ELK3	P41970	407 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	TTPA	P49638	278 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	CRADD	P78560	199 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	GTF2H3	Q13889	308 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	GPR19	Q15760	415 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	KCTD19	Q17RG1	926 aa	Predicted RBP	15.04	■□□□□ -0
HDLBP-238	ENST00000479894	VWA2	Q5GFL6	755 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	RNF187	Q5TA31	235 aa	Predicted RBP	15.04	■□□□□ -0
HDLBP-238	ENST00000479894	B3GNTL1	Q67FW5	361 aa	Predicted RBP	15.04	■□□□□ -0
HDLBP-238	ENST00000479894	ZNF449	Q6P9G9	518 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	ADGRG6	Q86SQ4	1221 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	CCDC25	Q86WR0	208 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	RELL1	Q8IUW5	271 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	PARP9	Q8IXQ6	854 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	OR13C4	Q8NGS5	318 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	OR13J1	Q8NGT2	312 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	HDAC10	Q969S8	669 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	CLIP3	Q96DZ5	547 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	TRAPPC9	Q96Q05	1148 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	SLX1A	Q9BQ83	275 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	FAM167B	Q9BTA0	163 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	FANCE	Q9HB96	536 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	SYTL2	Q9HCH5	934 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	SAYSD1	Q9NPB0	183 aa		15.04	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms