RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ADGRD1Q6QNK2 874 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 SPESP1Q6UW49 350 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 CMC1Q7Z7K0 106 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 CLEC14AQ86T13 490 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 SPACA3Q8IXA5 215 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 CNPY4Q8N129 248 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 UBLCP1Q8WVY7 318 aaPredicted RBP25.88■■□□□ 1.73
CCM2-211ENST00000478582 CAVIN3Q969G5 261 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 ISL2Q96A47 359 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 SLC41A2Q96JW4 573 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 CCDC138Q96M89 665 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 IKZF3Q9UKT9 509 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 IGHV5-51A0A0C4DH38 117 aa25.87■■□□□ 1.73
CCM2-211ENST00000478582 ZNF839A8K0R7 811 aa25.87■■□□□ 1.73
CCM2-211ENST00000478582 CCDC166P0CW27 439 aa25.87■■□□□ 1.73
CCM2-211ENST00000478582 UGT2B7P16662 529 aa25.87■■□□□ 1.73
CCM2-211ENST00000478582 PEBP1P30086 187 aaKnown RBP25.87■■□□□ 1.73
CCM2-211ENST00000478582 PHKG1Q16816 387 aa25.87■■□□□ 1.73
CCM2-211ENST00000478582 SLC5A12Q1EHB4 618 aa25.87■■□□□ 1.73
CCM2-211ENST00000478582 SBSNQ6UWP8 590 aa25.87■■□□□ 1.73
CCM2-211ENST00000478582 ZNF480Q8WV37 535 aa25.87■■□□□ 1.73
CCM2-211ENST00000478582 NAF1Q96HR8 494 aaKnown RBP25.87■■□□□ 1.73
CCM2-211ENST00000478582 ISM1B1AKI9 464 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 SLC16A8O95907 504 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 ALDOAP04075 364 aaKnown RBP25.86■■□□□ 1.73
CCM2-211ENST00000478582 HIST1H2AGP0C0S8 130 aaPredicted RBP25.86■■□□□ 1.73
CCM2-211ENST00000478582 NELFEP18615 380 aaKnown RBP25.86■■□□□ 1.73
CCM2-211ENST00000478582 HIST1H2ADP20671 130 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 SERPINB8P50452 374 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 PNLIPRP1P54315 467 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 AP1S2P56377 157 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 ATP6V0D1P61421 351 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 NAA30Q147X3 362 aaPredicted RBP25.86■■□□□ 1.73
CCM2-211ENST00000478582 LGSNQ5TDP6 509 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 RAPH1Q70E73 1250 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 KCNE4Q8WWG9 221 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 HIST1H2AHQ96KK5 128 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 HIST1H2AJQ99878 128 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 H2AFJQ9BTM1 129 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 TRIM54Q9BYV2 358 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 SNX15Q9NRS6 342 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 PCDHGA7Q9Y5G6 932 aa25.86■■□□□ 1.73
CCM2-211ENST00000478582 A0A087X1B8 175 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 A0A1W2PPV9 198 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 B4E171 279 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 CDC7O00311 574 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 FKBP9O95302 570 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 ZBTB11O95625 1053 aaPredicted RBP25.85■■□□□ 1.73
CCM2-211ENST00000478582 SYF2O95926 243 aaKnown RBP25.85■■□□□ 1.73
CCM2-211ENST00000478582 C2P06681 752 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 JMJD7P0C870 316 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 HGFP14210 728 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 CDH3P22223 829 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 OAS2P29728 719 aaKnown RBP25.85■■□□□ 1.73
CCM2-211ENST00000478582 HSD17B3P37058 310 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 TSPAN7P41732 249 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 MAGEA12P43365 314 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 SEPHS1P49903 392 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 TLE3Q04726 772 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 PPP1R3AQ16821 1122 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 LRRC56Q8IYG6 542 aaPredicted RBP25.85■■□□□ 1.73
CCM2-211ENST00000478582 BMPERQ8N8U9 685 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 LMNTD1Q8N9Z9 388 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 SMPDL3AQ92484 453 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 CRELD1Q96HD1 420 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 PPM1MQ96MI6 270 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 DPH1Q9BZG8 443 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 PPCSQ9HAB8 311 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 RRAGDQ9NQL2 400 aaPredicted RBP25.85■■□□□ 1.73
CCM2-211ENST00000478582 CTNNAL1Q9UBT7 734 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 ACOT9Q9Y305 439 aa25.85■■□□□ 1.73
CCM2-211ENST00000478582 E7ENX8 843 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 SNRPAP09012 282 aaKnown RBP25.84■■□□□ 1.73
CCM2-211ENST00000478582 FGF3P11487 239 aaPredicted RBP25.84■■□□□ 1.73
CCM2-211ENST00000478582 CCL4P13236 92 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 CD1DP15813 335 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 IMPA1P29218 277 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 TYK2P29597 1187 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 TAP2Q03519 686 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 FASTKQ14296 549 aaKnown RBP25.84■■□□□ 1.73
CCM2-211ENST00000478582 ADAMTSL2Q86TH1 951 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 C2orf73Q8N5S3 287 aaPredicted RBP25.84■■□□□ 1.73
CCM2-211ENST00000478582 TRAPPC9Q96Q05 1148 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 B3GNT4Q9C0J1 378 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 OCIAD1Q9NX40 245 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 SIDT1Q9NXL6 827 aaKnown RBP25.84■■□□□ 1.73
CCM2-211ENST00000478582 STOX2Q9P2F5 926 aaPredicted RBP25.84■■□□□ 1.73
CCM2-211ENST00000478582 PISDQ9UG56 409 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 TLK1Q9UKI8 766 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 BTRCQ9Y297 605 aa25.84■■□□□ 1.73
CCM2-211ENST00000478582 A0A0J9YY10 115 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 NPEPPSL1A6NEC2 478 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 SLC9B1P1A6NJY1 282 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 EFCAB7A8K855 629 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 HSD11B2P80365 405 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 CDKL1Q00532 357 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 MC2RQ01718 297 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 CSHL1Q14406 222 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 FBXO38Q6PIJ6 1188 aa25.83■■□□□ 1.73
CCM2-211ENST00000478582 TBC1D1Q86TI0 1168 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms