RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 SLC38A9Q8NBW4 561 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 HMGCLL1Q8TB92 370 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 EEF1AKMT1Q8WVE0 214 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 KIAA1143Q96AT1 154 aaPredicted RBP15.02■□□□□ -0
HMGA1-206ENST00000478214 PKP4Q99569 1192 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 CHRNA10Q9GZZ6 450 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 AKIRIN1Q9H9L7 192 aaPredicted RBP15.02■□□□□ -0
HMGA1-206ENST00000478214 SMYD2Q9NRG4 433 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.02■□□□□ -0
HMGA1-206ENST00000478214 IL17BQ9UHF5 180 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 PADI1Q9ULC6 663 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 SMG1Q96Q15 3661 aaKnown RBP15.02□□□□□ -0.01
HMGA1-206ENST00000478214 A0A1W2PPV9 198 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 GFYI3L273 518 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 EIF3FO00303 357 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-206ENST00000478214 CPNE3O75131 537 aaKnown RBP15.01□□□□□ -0.01
HMGA1-206ENST00000478214 CTSBP07858 339 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 ERGP11308 486 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 F8A1P23610 371 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 SKIV2L2P42285 1042 aaKnown RBP15.01□□□□□ -0.01
HMGA1-206ENST00000478214 RGS4P49798 205 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 CYP4F2P78329 520 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 UBE2R2Q712K3 238 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-206ENST00000478214 MMGT1Q8N4V1 131 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 DNAJC22Q8N4W6 341 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 ZSCAN1Q8NBB4 408 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 NOA1Q8NC60 698 aaKnown RBP15.01□□□□□ -0.01
HMGA1-206ENST00000478214 FBXO15Q8NCQ5 510 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-206ENST00000478214 DLG3Q92796 817 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 BBC3Q96PG8 261 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-206ENST00000478214 OLFM1Q99784 485 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 MIPEPQ99797 713 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 SLC12A9Q9BXP2 914 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 LHX9Q9NQ69 397 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 SERTAD3Q9UJW9 196 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 CROTQ9UKG9 612 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 CORO1CQ9ULV4 474 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-206ENST00000478214 VWA7Q9Y334 891 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 PCDHB3Q9Y5E6 796 aa15.01□□□□□ -0.01
HMGA1-206ENST00000478214 ZBTB14O43829 449 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 SLC16A8O95907 504 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 SYF2O95926 243 aaKnown RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 MT-ND3P03897 115 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 CCNYL3P0C7X3 344 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 SPTBP11277 2137 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 CYP2A7P20853 494 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 FDXRP22570 491 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 DLSTP36957 453 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 ITGA1P56199 1179 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 GPX6P59796 221 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 YBX1P67809 324 aaKnown RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 GUCY2DQ02846 1103 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 GPS2Q13227 327 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 PDAP1Q13442 181 aaKnown RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 FCRL6Q6DN72 434 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 FAM45BPQ6NSW5 357 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 FAM199XQ6PEV8 388 aaPredicted RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 FIGLAQ6QHK4 219 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 SUSD1Q6UWL2 747 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 SLC26A11Q86WA9 606 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 ZC3HC1Q86WB0 502 aaKnown RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 MNS1Q8NEH6 495 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 OR2A1Q8NGT9 310 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 KIF18AQ8NI77 898 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 FAM45AQ8TCE6 357 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 ZNF480Q8WV37 535 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 SEC14L1Q92503 715 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 N4BP2L2Q92802 583 aaPredicted RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 LINGO1Q96FE5 620 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 SLC45A3Q96JT2 553 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 UBL7Q96S82 380 aaPredicted RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 ACAT2Q9BWD1 397 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 PHACTR1Q9C0D0 580 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 SPRTNQ9H040 489 aaPredicted RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 ADAMTS6Q9UKP5 1117 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 MRPS18BQ9Y676 258 aaKnown RBP15□□□□□ -0.01
HMGA1-206ENST00000478214 CACNA1GO43497 2377 aa15□□□□□ -0.01
HMGA1-206ENST00000478214 TCRBV9S1A1TA0A576 114 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 CTAGE15A4D2H0 777 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 CXorf49A8MYA2 514 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-206ENST00000478214 E7EQ34 232 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 TERTO14746 1132 aaKnown RBP14.99□□□□□ -0.01
HMGA1-206ENST00000478214 NKX2-8O15522 239 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 TSPAN12O95859 305 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 CTAGE8P0CG41 777 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 SAT1P21673 171 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 GRIA3P42263 894 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 MAGEA4P43358 317 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 PNLIPRP1P54315 467 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 RHDQ02161 417 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 TSTA3Q13630 321 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-206ENST00000478214 COL9A2Q14055 689 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-206ENST00000478214 ARHGAP19Q14CB8 494 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 SOWAHCQ53LP3 525 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-206ENST00000478214 LRRC8EQ6NSJ5 796 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 PCSK4Q6UW60 755 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 C3orf62Q6ZUJ4 267 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 CTAGE6Q86UF2 777 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 CTAGE4Q8IX94 777 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 GPR135Q8IZ08 494 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms