RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CIB1Q99828 191 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SIKE1Q9BRV8 207 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 HAUS8Q9BT25 410 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 TRIM62Q9BVG3 475 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PINK1Q9BXM7 581 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 MRPL37Q9BZE1 423 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 PUS3Q9BZE2 481 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 API5Q9BZZ5 524 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 CCSER1Q9C0I3 900 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 HSD3B7Q9H2F3 369 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PDZD7Q9H5P4 517 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 STN1Q9H668 368 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 AZI2Q9H6S1 392 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 LRRC19Q9H756 370 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PANK3Q9H999 370 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ARFGAP3Q9NP61 516 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 RPRD1BQ9NQG5 326 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 ENTPD7Q9NQZ7 604 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 KLHL1Q9NR64 748 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ATAD3AQ9NVI7 634 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 TAS2R7Q9NYW3 318 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 NINJ2Q9NZG7 142 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 C1RLQ9NZP8 487 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 COX16Q9P0S2 106 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SENP1Q9P0U3 644 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 KIF17Q9P2E2 1029 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ORC3Q9UBD5 711 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 ASIC3Q9UHC3 531 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SLC7A8Q9UHI5 535 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 LCMT1Q9UIC8 334 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 VPS28Q9UK41 221 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ZNF148Q9UQR1 794 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 DERAQ9Y315 318 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 RNF215Q9Y6U7 377 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ABCC11Q96J66 1382 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PPIP5K1Q6PFW1 1433 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CPDO75976 1380 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 MAP3K5Q99683 1374 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 XKRY2A2RUG3 117 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 LRRD1A4D1F6 860 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PI4KAP2A4QPH2 592 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 GOLGA6L9A6NEM1 432 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 GPR89AB7ZAQ6 455 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 HSBP1L1C9JCN9 74 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 BLOC1S5-TXNDC5H3BN57 136 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 H3BQV1 296 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 KMOO15229 486 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CASC3O15234 703 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 BIRC5O15392 142 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PCDH7O60245 1069 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 FRAT2O75474 233 aaPredicted RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 SPAG6O75602 509 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 ERAL1O75616 437 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 CBR3O75828 277 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 IDH1O75874 414 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 CSTBP04080 98 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 IVLP07476 585 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 QDPRP09417 244 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CSF1P09603 554 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 UBTFL6P0CB48 400 aaPredicted RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 GPR89BP0CG08 455 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CCDC166P0CW27 439 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 DNAH10OSP0CZ25 163 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 DDX5P17844 614 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 CASTP20810 708 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 GALP22466 123 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 S100A1P23297 94 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 GLRA2P23416 452 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 MAPK4P31152 587 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 TAGLN2P37802 199 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 PNPLA4P41247 253 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 GARSP41250 739 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 TECP42680 631 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 HSPA13P48723 471 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 LUMP51884 338 aaPredicted RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 CARD18P57730 90 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 VBP1P61758 197 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 YWHAZP63104 245 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 KCNJ10P78508 379 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 S100A12P80511 92 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PRKCEQ02156 737 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 GCNT1Q02742 428 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 ITGADQ13349 1161 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 RIPK1Q13546 671 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CAMK2DQ13557 499 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CUL3Q13618 768 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 BLMHQ13867 455 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 ARHGAP19Q14CB8 494 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 WDR43Q15061 677 aaKnown RBP eCLIP2.42□□□□□ -2.02
XRN1-211ENST00000477237 NONOQ15233 471 aaKnown RBP eCLIP2.42□□□□□ -2.02
XRN1-211ENST00000477237 SMAD1Q15797 465 aaKnown RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 ESCO2Q56NI9 601 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 PPP6R3Q5H9R7 873 aaPredicted RBP2.42□□□□□ -2.02
XRN1-211ENST00000477237 C1orf141Q5JVX7 400 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 CES4AQ5XG92 561 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 HAUS3Q68CZ6 603 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 SIGIRRQ6IA17 410 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 ZCCHC12Q6PEW1 402 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 GFRALQ6UXV0 394 aa2.42□□□□□ -2.02
XRN1-211ENST00000477237 C15orf39Q6ZRI6 1047 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms