RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PKMP14618 531 aaKnown RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 CHRM3P20309 590 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 ATP5DP30049 168 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 GRIA3P42263 894 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 ANKRD20A4Q4UJ75 823 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 ZC3H12BQ5HYM0 836 aaKnown RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 CCDC137Q6PK04 289 aaKnown RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 TAX1BP1Q86VP1 789 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 CILP2Q8IUL8 1156 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 MAGEC3Q8TD91 643 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 ACTRT1Q8TDG2 376 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 DENND1AQ8TEH3 1009 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 SKA2Q8WVK7 121 aaPredicted RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 MIB2Q96AX9 1013 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 ZNF285Q96NJ3 590 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 IP6K3Q96PC2 410 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 NAP1L3Q99457 506 aaPredicted RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 TRIM56Q9BRZ2 755 aaKnown RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 NDC1Q9BTX1 674 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 XAB2Q9HCS7 855 aaKnown RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 SLC22A11Q9NSA0 550 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 TXLNGQ9NUQ3 528 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 INTS7Q9NVH2 962 aaKnown RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 IFT80Q9P2H3 777 aaPredicted RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 GALPQ9UBC7 116 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 GPN3Q9UHW5 284 aaPredicted RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 RUVBL2Q9Y230 463 aaKnown RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 CRYL1Q9Y2S2 319 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 KLK4Q9Y5K2 254 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 ZCWPW2A0A1B0GU75 182 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 A0A1W2PPV9 198 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 KRT87PA6NCN2 255 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 ZNF185O15231 689 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 SRPX2O60687 465 aaPredicted RBP10.36□□□□□ -0.75
SEC13-214ENST00000476597 PAMP19021 973 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 ALAS2P22557 587 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 MAGEA3P43357 314 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 BDKRB1P46663 353 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 CD97P48960 835 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 PGDP52209 483 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 ARSFP54793 590 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 RRADP55042 308 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 MLLT10P55197 1068 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 ATP1A4Q13733 1029 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 DHX34Q14147 1143 aaKnown RBP10.36□□□□□ -0.75
SEC13-214ENST00000476597 CYP2A13Q16696 494 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 NKAIN1Q4KMZ8 207 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 ACSBG2Q5FVE4 666 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 TCTE1Q5JU00 501 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 CASC4Q6P4E1 433 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 CNSTQ6PJW8 725 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 TTLL10Q6ZVT0 673 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 RAB43Q86YS6 212 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 RAB42Q8N4Z0 105 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 NAT8LQ8N9F0 302 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 FDCSPQ8NFU4 85 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 OR2A1Q8NGT9 310 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 OR9A1PQ8NGU1 263 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 OR2Y1Q8NGV0 311 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 COG1Q8WTW3 980 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 DLG3Q92796 817 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 PTERQ96BW5 349 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 SIGLEC10Q96LC7 697 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 SERPINB12Q96P63 405 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 INTS10Q9NVR2 710 aaKnown RBP10.36□□□□□ -0.75
SEC13-214ENST00000476597 IRAK4Q9NWZ3 460 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 IL1RAPL1Q9NZN1 696 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 SPATA7Q9P0W8 599 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 SAMD15Q9P1V8 674 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 NDOR1Q9UHB4 597 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 VPS9D1Q9Y2B5 631 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 PTRH2Q9Y3E5 179 aaKnown RBP10.36□□□□□ -0.75
SEC13-214ENST00000476597 ZNF451Q9Y4E5 1061 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 PIKFYVEQ9Y2I7 2098 aa10.36□□□□□ -0.75
SEC13-214ENST00000476597 USP9YO00507 2555 aaPredicted RBP10.35□□□□□ -0.75
SEC13-214ENST00000476597 FITM1A5D6W6 292 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 GOLGA8MH3BSY2 632 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 PGRMC1O00264 195 aaKnown RBP10.35□□□□□ -0.75
SEC13-214ENST00000476597 CTSVO60911 334 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 PSIP1O75475 530 aaKnown RBP10.35□□□□□ -0.75
SEC13-214ENST00000476597 UMODP07911 640 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 ITGAXP20702 1163 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 MCM3P25205 808 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 OTX2P32243 289 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 FOLR3P41439 243 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 FNTAP49354 379 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 CLCN7P51798 805 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 CTBP1Q13363 440 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 THOC5Q13769 683 aaKnown RBP10.35□□□□□ -0.75
SEC13-214ENST00000476597 FASTKQ14296 549 aaKnown RBP10.35□□□□□ -0.75
SEC13-214ENST00000476597 GRM7Q14831 915 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 SLC9A5Q14940 896 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 KLHL38Q2WGJ6 581 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 FAM214AQ32MH5 1076 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 YOD1Q5VVQ6 348 aaPredicted RBP10.35□□□□□ -0.75
SEC13-214ENST00000476597 FBXO42Q6P3S6 717 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 CYHR1Q6ZMK1 362 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 OVCH1Q7RTY7 1134 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 MRGPREQ86SM8 312 aa10.35□□□□□ -0.75
SEC13-214ENST00000476597 HPS6Q86YV9 775 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms