RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 BTBD9Q96Q07 612 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 CGREF1Q99674 301 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 KIFC1Q9BW19 673 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 OR51B5Q9H339 312 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 FBXO44Q9H4M3 255 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 GSTO2Q9H4Y5 243 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ABCB8Q9NUT2 735 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 NDUFA13Q9P0J0 144 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 COLQQ9Y215 455 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 A0A096LPI6 279 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 A0A1W2PPK0 400 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 PIPSLA2A3N6 862 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 EPOPA6NHQ4 379 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 NRG2O14511 850 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 EPN2O95208 641 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 KRT6AP02538 564 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 KRT6BP04259 564 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 IL6P05231 212 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 GPIP06744 558 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 FHP07954 510 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 TSHRP16473 764 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 EPHA2P29317 976 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 C21orf33P30042 268 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 PIGAP37287 484 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 OPRL1P41146 370 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 KRT6CP48668 564 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ST13P50502 369 aaKnown RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 BMXP51813 675 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 KCNC4Q03721 635 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 HNRNPDQ14103 355 aaKnown RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 NPTX1Q15818 432 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 KIAA0930Q6ICG6 404 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 MTFR2Q6P444 385 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF549Q6P9A3 640 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ERMP1Q7Z2K6 904 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 GOLGA7Q7Z5G4 137 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 WDR53Q7Z5U6 358 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 BCDIN3DQ7Z5W3 292 aaKnown RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 PGBD5Q8N414 524 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 LILRA3Q8N6C8 439 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 CELF5Q8N6W0 485 aaKnown RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 C2CD4AQ8NCU7 369 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 OR2T11Q8NH01 316 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 TMEM159Q96B96 161 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 NSMCE3Q96MG7 304 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 NRTNQ99748 197 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 MCMBPQ9BTE3 642 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 CNPPD1Q9BV87 410 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 SORBS1Q9BX66 1292 aaKnown RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 SNTG1Q9NSN8 517 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 MRGBPQ9NV56 204 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ERVK13-1Q9NX77 482 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 GPRC5BQ9NZH0 403 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 TEKT2Q9UIF3 430 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ITM2BQ9Y287 266 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 GREB1LQ9C091 1923 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 MBLAC1A4D2B0 266 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 PDZK1P1A8MUH7 402 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 H3BNH8 94 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 FPGTO14772 594 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 FGF10O15520 208 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 LINC01565O15544 149 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 RGS14O43566 566 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 CXCL14O95715 111 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 IL1BP01584 269 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 TRBC1P01850 177 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 APOA1P02647 267 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 CD36P16671 472 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 WARSP23381 471 aaKnown RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 GNPDA1P46926 289 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 NRIP1P48552 1158 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ZSWIM7Q19AV6 140 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 PTCHD3Q3KNS1 767 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ATP13A5Q4VNC0 1218 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 ADGRD2Q7Z7M1 963 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 RGL4Q8IZJ4 473 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 APCDD1Q8J025 514 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 TMEM86AQ8N2M4 240 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 MDGA1Q8NFP4 955 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 PIGKQ92643 395 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 WBP2Q969T9 261 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 BTN2A3PQ96KV6 586 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 Q96MT0 163 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 SLC22A12Q96S37 553 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 TRMT61BQ9BVS5 477 aaKnown RBP4.87□□□□□ -1.63
CCDC39-204ENST00000476379 YIPF2Q9BWQ6 316 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 C1orf21Q9H246 121 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 BRD9Q9H8M2 597 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 TIGARQ9NQ88 270 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 FETUBQ9UGM5 382 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 DNMT3LQ9UJW3 386 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 KLHL20Q9Y2M5 609 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 PCDHGA8Q9Y5G5 932 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 CORINQ9Y5Q5 1042 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 DMXL1Q9Y485 3027 aa4.87□□□□□ -1.63
CCDC39-204ENST00000476379 TRPM7Q96QT4 1865 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 RBM47A0AV96 593 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 H3BMQ9 156 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF195O14628 629 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 STK16O75716 305 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms