RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ASCL2Q99929 193 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 DDX50Q9BQ39 737 aaKnown RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 WDR77Q9BQA1 342 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 KXD1Q9BQD3 176 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ATG101Q9BSB4 218 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ZNF577Q9BSK1 485 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 MSTO1Q9BUK6 570 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 IDI2Q9BXS1 227 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CCSER1Q9C0I3 900 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 SEMA6AQ9H2E6 1030 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 FOXP1Q9H334 677 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CD93Q9NPY3 652 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ADARB2Q9NS39 739 aaKnown RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 TMOD3Q9NYL9 352 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CLIP2Q9UDT6 1046 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CDC14AQ9UNH5 594 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 PAM16Q9Y3D7 125 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CCDC88BA6NC98 1476 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ERCC6Q03468 1493 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 A0A087WZY1 265 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 PRSS51A0A1B0GVH4 220 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ILVBLA1L0T0 632 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 MACROD2A1Z1Q3 448 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 EME2A4GXA9 379 aaPredicted RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 GAGE12JA6NER3 117 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 NEMP2A6NFY4 417 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 SOCS6O14544 535 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ADAM10O14672 748 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ANGPT2O15123 496 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 MDM4O15151 490 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 CLDN3O15551 220 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 CYTIPO60759 359 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 PRAF2O60831 178 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ATG13O75143 517 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 IDH1O75874 414 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 CXCL14O95715 111 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 GSRP00390 522 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 PGK2P07205 417 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 EPB41P11171 864 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 SKILP12757 684 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 HNRNPA2B1P22626 353 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 DNAJB1P25685 340 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 GDI1P31150 447 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 AKT2P31751 481 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 IER3P46695 156 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 TAS2R38P59533 333 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 NHLH1Q02575 133 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 EGR4Q05215 589 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 CHIT1Q13231 466 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 SNX1Q13596 522 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 DAZAP2Q15038 168 aaPredicted RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ACKR1Q16570 336 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 EPC2Q52LR7 807 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 LRRC23Q53EV4 343 aaPredicted RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 PRSS55Q6UWB4 352 aaPredicted RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ARSKQ6UWY0 536 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 B3GLCTQ6Y288 498 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 YTHDF3Q7Z739 585 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 CUZD1Q86UP6 607 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ANKRD46Q86W74 232 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ZC3HC1Q86WB0 502 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 AMIGO1Q86WK6 493 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ZNF573Q86YE8 665 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 SLC5A8Q8N695 610 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 PCDH20Q8N6Y1 951 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 L3MBTL4Q8NA19 623 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 TEX45Q8NA69 505 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 SLC5A11Q8WWX8 675 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 DNAAF4Q8WXU2 420 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 FCGR1BQ92637 280 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 PROX1Q92786 737 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 THOC1Q96FV9 657 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 EPSTI1Q96J88 318 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 HAUS8Q9BT25 410 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 LMF2Q9BU23 707 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ZNF416Q9BWM5 594 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 POLDIP3Q9BY77 421 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 ACPTQ9BZG2 426 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 DNAJC4Q9NNZ3 241 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 FARSBQ9NSD9 589 aaKnown RBP4.01□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM51Q9NW97 253 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 FLRT1Q9NZU1 646 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 FBXL2Q9UKC9 423 aa4.01□□□□□ -1.77
VPS13D-207ENST00000476169 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM221A6NGB7 291 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 ZSCAN5CA6NGD5 496 aaPredicted RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 ZNF814B7Z6K7 855 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 E5RJQ4 531 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 F8WDY8 70 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CYR61O00622 381 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 ANKRD28O15084 1053 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CNOT3O75175 753 aaKnown RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 RPS6KA5O75582 802 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 FSHBP01225 129 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 IFNA2P01563 188 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CSN3P07498 182 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 GLRA2P23416 452 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CYP2F1P24903 491 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms