RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CENPSQ8N2Z9 138 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 PARP8Q8N3A8 854 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 KIAA1958Q8N8K9 716 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 ABHD11Q8NFV4 315 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 OR6P1Q8NGX9 317 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 DNAJB14Q8TBM8 379 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 ATOH1Q92858 354 aaPredicted RBP6.71□□□□□ -1.34
UBR4-212ENST00000475973 USP7Q93009 1102 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 RNF34Q969K3 372 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 SLC35B4Q969S0 331 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 TMBIM1Q969X1 311 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 VOPP1Q96AW1 172 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 VPS33AQ96AX1 596 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 ZNF707Q96C28 371 aaPredicted RBP6.71□□□□□ -1.34
UBR4-212ENST00000475973 MYEOVQ96EZ4 313 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 SH3YL1Q96HL8 342 aaPredicted RBP6.71□□□□□ -1.34
UBR4-212ENST00000475973 REXO5Q96IC2 774 aaKnown RBP6.71□□□□□ -1.34
UBR4-212ENST00000475973 NSMCE2Q96MF7 247 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 TMEM74Q96NL1 305 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 SEMA3CQ99985 751 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 SLX1AQ9BQ83 275 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 NTMT1Q9BV86 223 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 UGT2B28Q9BY64 529 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 KCNK12Q9HB15 430 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 RDH14Q9HBH5 336 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 NECTIN3Q9NQS3 549 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 INIPQ9NRY2 104 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 DCAF13Q9NV06 445 aaKnown RBP6.71□□□□□ -1.34
UBR4-212ENST00000475973 PAK1IP1Q9NWT1 392 aaPredicted RBP6.71□□□□□ -1.34
UBR4-212ENST00000475973 ZDHHC3Q9NYG2 299 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 GALPQ9UBC7 116 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 MTRRQ9UBK8 725 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 ITGB1BP2Q9UKP3 347 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 BLOC1S6Q9UL45 172 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 FAF1Q9UNN5 650 aaPredicted RBP6.71□□□□□ -1.34
UBR4-212ENST00000475973 USP22Q9UPT9 525 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 AURKCQ9UQB9 309 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 WDR37Q9Y2I8 494 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 CRYL1Q9Y2S2 319 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 COQ6Q9Y2Z9 468 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 ASB1Q9Y576 335 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 TNPO3Q9Y5L0 923 aaKnown RBP6.71□□□□□ -1.34
UBR4-212ENST00000475973 ARL5AQ9Y689 179 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 AP1M2Q9Y6Q5 423 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 A3GALT2U3KPV4 340 aa6.71□□□□□ -1.34
UBR4-212ENST00000475973 ATG2AQ2TAZ0 1938 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 BRWD1Q9NSI6 2320 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 C16orf96A6NNT2 1141 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 FAM220BPB1ANY3 271 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 CCL22O00626 93 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 GAPDHSO14556 408 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 AREL1O15033 823 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 CAPN5O15484 640 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 TAPBPO15533 448 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 KDELR3O43731 214 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 SYNCRIPO60506 623 aaKnown RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 SNX2O60749 519 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 FKBP9O95302 570 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 PAPLNO95428 1278 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 MT-CO1P00395 513 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 PDGFBP01127 241 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 LRG1P02750 347 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 ALBP02768 609 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 PDGFAP04085 211 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 SRFP11831 508 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 NCK1P16333 377 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 ZNF182P17025 639 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 EFNA1P20827 205 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 TGM1P22735 817 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 HTR1BP28222 390 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 GGT5P36269 586 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 ACVRL1P37023 503 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 GRIK1P39086 918 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 DCTP40126 519 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 PTGER3P43115 390 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 CTSOP43234 321 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 TTPAP49638 278 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 AGTR2P50052 363 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 KPNA1P52294 538 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 SLC35A2P78381 396 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 TCF15Q12870 199 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 BNIP3Q12983 259 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 CBX3Q13185 183 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 RAB33AQ14088 237 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 KEAP1Q14145 624 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 PTPRCAPQ14761 206 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 PCSK7Q16549 785 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 FAM98BQ52LJ0 330 aaKnown RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 SLC2A7Q6PXP3 512 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 CYP20A1Q6UW02 462 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 R3HCC1LQ7Z5L2 792 aaKnown RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 SNX20Q7Z614 316 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 GRASPQ7Z6J2 395 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 IGFN1Q86VF2 1251 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 DCP2Q8IU60 420 aaKnown RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 SPATA2LQ8IUW3 424 aaPredicted RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 ZC3H7AQ8IWR0 971 aaKnown RBP6.7□□□□□ -1.34
UBR4-212ENST00000475973 OFCC1Q8IZS5 231 aa6.7□□□□□ -1.34
UBR4-212ENST00000475973 LINC00528Q8N1L1 170 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms