RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PHGDHO43175 533 aaKnown RBP16.34■□□□□ 0.21
SCAF11-206ENST00000474828 TNFSF15O95150 251 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 JMJD7P0C870 316 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 FGF5P12034 268 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 HGFP14210 728 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 ST6GAL1P15907 406 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 ITIH1P19827 911 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 MAP4P27816 1152 aaKnown RBP16.34■□□□□ 0.21
SCAF11-206ENST00000474828 OAS2P29728 719 aaKnown RBP16.34■□□□□ 0.21
SCAF11-206ENST00000474828 GABRA4P48169 554 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 PNLIPRP1P54315 467 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 SLC12A2P55011 1212 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 ATP6V0D1P61421 351 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 CYP4F3Q08477 520 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 UAP1Q16222 522 aaPredicted RBP16.34■□□□□ 0.21
SCAF11-206ENST00000474828 CDKL4Q5MAI5 379 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 SNAP47Q5SQN1 464 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 EMBQ6PCB8 327 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 SMPDL3AQ92484 453 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 CAVIN3Q969G5 261 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 FCRL4Q96PJ5 515 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 TEFMQ96QE5 360 aaKnown RBP16.34■□□□□ 0.21
SCAF11-206ENST00000474828 ZPBPQ9BS86 351 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 ASPSCR1Q9BZE9 553 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 CCDC86Q9H6F5 360 aaKnown RBP16.34■□□□□ 0.21
SCAF11-206ENST00000474828 KLHL3Q9UH77 587 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 ZZEF1O43149 2961 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 ZFHX4Q86UP3 3567 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 IGF2RP11717 2491 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 GSAPA4D1B5 854 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 SLC9B1P1A6NJY1 282 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 EFCAB7A8K855 629 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 TARM1B6A8C7 271 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 H3BMH7 237 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 RASSF9O75901 435 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 INHBAP08476 426 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 CD1DP15813 335 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 RELAQ04206 551 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 FASTKQ14296 549 aaKnown RBP16.33■□□□□ 0.2
SCAF11-206ENST00000474828 TIFABQ6ZNK6 161 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 ADAMTSL2Q86TH1 951 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 KLHDC8AQ8IYD2 350 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 MDM1Q8TC05 714 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 FBXL8Q96CD0 374 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 TCTN2Q96GX1 697 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 SGPP1Q9BX95 441 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 PPCSQ9HAB8 311 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 SNX15Q9NRS6 342 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 THSD1Q9NS62 852 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 EURLQ9NYK6 297 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 STOX2Q9P2F5 926 aaPredicted RBP16.33■□□□□ 0.2
SCAF11-206ENST00000474828 PISDQ9UG56 409 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 CIDEBQ9UHD4 219 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 TSR3Q9UJK0 312 aaKnown RBP16.33■□□□□ 0.2
SCAF11-206ENST00000474828 OARD1Q9Y530 152 aa16.33■□□□□ 0.2
SCAF11-206ENST00000474828 EXOC1LA0A1B0GW35 172 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 TAF4O00268 1085 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 CDC7O00311 574 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 KRT38O76015 456 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 C2P06681 752 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 CCDC166P0CW27 439 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 FOLR1P15328 257 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 SAT1P21673 171 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 CDH3P22223 829 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 CD82P27701 267 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 RBMS1P29558 406 aaKnown RBP16.32■□□□□ 0.2
SCAF11-206ENST00000474828 MSH2P43246 934 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 SH3BP2P78314 561 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 DLG1Q12959 904 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 ZIC1Q15915 447 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 MROH9Q5TGP6 573 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 CYB5D1Q6P9G0 228 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 PROSER1Q86XN7 944 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 DTX1Q86Y01 620 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 TDRPQ86YL5 185 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 CENPLQ8N0S6 344 aaPredicted RBP16.32■□□□□ 0.2
SCAF11-206ENST00000474828 MREGQ8N565 214 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 OR2L3Q8NG85 312 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 OR8K5Q8NH50 307 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 OR56A3Q8NH54 315 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 FGF11Q92914 225 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 KIAA1191Q96A73 305 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 ZUFSPQ96AP4 578 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 ZNF501Q96CX3 271 aaPredicted RBP16.32■□□□□ 0.2
SCAF11-206ENST00000474828 GPR78Q96P69 363 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 PARD6BQ9BYG5 372 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 ZMYND15Q9H091 742 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 IGSF5Q9NSI5 407 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 AK5Q9Y6K8 562 aa16.32■□□□□ 0.2
SCAF11-206ENST00000474828 A0A087X1B8 175 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 ISM1B1AKI9 464 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 TLX3O43711 291 aaPredicted RBP16.31■□□□□ 0.2
SCAF11-206ENST00000474828 NUDT17P0C025 328 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 SLC5A2P31639 672 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 GGT5P36269 586 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 PPM1FP49593 454 aaPredicted RBP16.31■□□□□ 0.2
SCAF11-206ENST00000474828 SEPHS1P49903 392 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 SERPINB8P50452 374 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 ACY1Q03154 408 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms