RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PACS1Q6VY07 963 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 MCATQ8IVS2 390 aaKnown RBP13.42□□□□□ -0.26
CCDC78-209ENST00000474647 TTC29Q8NA56 475 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-209ENST00000474647 DENND1AQ8TEH3 1009 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 NACC2Q96BF6 587 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 LRRC40Q9H9A6 602 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 OLAHQ9NV23 265 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 ENTPD4Q9Y227 616 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 MAU2Q9Y6X3 613 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 CACNA1CQ13936 2221 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 ANKRD17O75179 2603 aaKnown RBP13.41□□□□□ -0.26
CCDC78-209ENST00000474647 ALBP02768 609 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 UQCRHP07919 91 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 GCGRP47871 477 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 HSPA14Q0VDF9 509 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 GRM7Q14831 915 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 CCDC38Q502W7 563 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 SP5Q6BEB4 398 aaPredicted RBP13.41□□□□□ -0.26
CCDC78-209ENST00000474647 AADACL2Q6P093 401 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 IGFL2Q6UWQ7 119 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 ISLR2Q6UXK2 745 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 PRSS58Q8IYP2 241 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 DTWD1Q8N5C7 304 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 LINC01555Q8NAE3 123 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 VPS50Q96JG6 964 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 IL17FQ96PD4 163 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 PANX2Q96RD6 677 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 SELENOSQ9BQE4 189 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 SLC26A1Q9H2B4 701 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 INTS7Q9NVH2 962 aaKnown RBP13.41□□□□□ -0.26
CCDC78-209ENST00000474647 NXT1Q9UKK6 140 aaKnown RBP13.41□□□□□ -0.26
CCDC78-209ENST00000474647 PCDHA13Q9Y5I0 950 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 PKDREJQ9NTG1 2253 aa13.41□□□□□ -0.26
CCDC78-209ENST00000474647 SCN3AQ9NY46 2000 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 A0A1B0GUH1 482 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 CCDC162PA2VCL2 907 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 OR1I1O60431 355 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 JRKO75564 520 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 TJP3O95049 919 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 METTL18O95568 372 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 RPN2P04844 631 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 FOXN2P32314 431 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 CETN2P41208 172 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 NAP1L1P55209 391 aaKnown RBP13.4□□□□□ -0.26
CCDC78-209ENST00000474647 ARG2P78540 354 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 PLOD1Q02809 727 aaPredicted RBP13.4□□□□□ -0.26
CCDC78-209ENST00000474647 MFAP5Q13361 173 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 SPA17Q15506 151 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 SF1Q15637 639 aaKnown RBP13.4□□□□□ -0.26
CCDC78-209ENST00000474647 PARP6Q2NL67 630 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 DNAJC21Q5F1R6 531 aaKnown RBP13.4□□□□□ -0.26
CCDC78-209ENST00000474647 ZC3H12BQ5HYM0 836 aaKnown RBP13.4□□□□□ -0.26
CCDC78-209ENST00000474647 TCTE1Q5JU00 501 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 KCTD11Q693B1 232 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 NLRP9Q7RTR0 991 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 VRK3Q8IV63 474 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 MCEMP1Q8IX19 187 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 SLC22A15Q8IZD6 547 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 BCORP1Q8N888 145 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 FAM71DQ8N9W8 422 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 CATSPER1Q8NEC5 780 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 OR11G2Q8NGC1 345 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 OR1N1Q8NGS0 311 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 SLC22A18Q96BI1 424 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 MESP1Q9BRJ9 268 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 CRB3Q9BUF7 120 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 ZNF160Q9HCG1 818 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 SEMA3GQ9NS98 782 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 COPG2Q9UBF2 871 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 EFR3BQ9Y2G0 817 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 PCDHA3Q9Y5H8 950 aa13.4□□□□□ -0.26
CCDC78-209ENST00000474647 F8W8V4 182 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 MAP2K7O14733 419 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 KLHL18O94889 574 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 S1PR4O95977 384 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 ACPPP15309 386 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 CD9P21926 228 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 PTPN7P35236 360 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 RWDD2BP57060 319 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 KCNK10P57789 538 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 VSX2P58304 361 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-209ENST00000474647 Q0VFX4 171 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 P3H1Q32P28 736 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 YOD1Q5VVQ6 348 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-209ENST00000474647 FCRL6Q6DN72 434 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 FIGLAQ6QHK4 219 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 DCUN1D3Q8IWE4 304 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 C8orf44Q96CB5 159 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 TTC1Q99614 292 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 SLX1AQ9BQ83 275 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 TSSK1BQ9BXA7 367 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 LUC7LQ9NQ29 371 aaKnown RBP13.39□□□□□ -0.27
CCDC78-209ENST00000474647 SLC39A10Q9ULF5 831 aa13.39□□□□□ -0.27
CCDC78-209ENST00000474647 NCOA6Q14686 2063 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-209ENST00000474647 AKAP9Q99996 3911 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 DYTNA2CJ06 578 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 MROH6A6NGR9 719 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 ZNF189O75820 626 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-209ENST00000474647 GOT2P00505 430 aaKnown RBP13.38□□□□□ -0.27
CCDC78-209ENST00000474647 HPP00738 406 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms