RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 ZBTB20Q9HC78 741 aaPredicted RBP23.79■■□□□ 1.4
PKD1-211ENST00000474088 CHRAC1Q9NRG0 131 aa23.79■■□□□ 1.4
PKD1-211ENST00000474088 CATSPERZQ9NTU4 200 aa23.79■■□□□ 1.4
PKD1-211ENST00000474088 SLC39A10Q9ULF5 831 aa23.79■■□□□ 1.4
PKD1-211ENST00000474088 PRMT5O14744 637 aaPredicted RBP23.78■■□□□ 1.4
PKD1-211ENST00000474088 ALBP02768 609 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 APRTP07741 180 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 SNX1Q13596 522 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 PCID2Q5JVF3 399 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 YOD1Q5VVQ6 348 aaPredicted RBP23.78■■□□□ 1.4
PKD1-211ENST00000474088 Q6ZS92 163 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 INPP5DQ92835 1189 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 WDR54Q9H977 334 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 ENAMQ9NRM1 1142 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 CUTCQ9NTM9 273 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 PAK5Q9P286 719 aa23.78■■□□□ 1.4
PKD1-211ENST00000474088 MARCH4Q9P2E8 410 aaPredicted RBP23.78■■□□□ 1.4
PKD1-211ENST00000474088 ESPL1Q14674 2120 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 DSCR3O14972 297 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 CD3EAPO15446 510 aaKnown RBP23.77■■□□□ 1.4
PKD1-211ENST00000474088 PRICKLE3O43900 615 aaPredicted RBP23.77■■□□□ 1.4
PKD1-211ENST00000474088 MCM3P25205 808 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 TTPAP49638 278 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 GRM7Q14831 915 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 TMED2Q15363 201 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 NKG7Q16617 165 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 TCTE1Q5JU00 501 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 PTRHD1Q6GMV3 140 aaKnown RBP23.77■■□□□ 1.4
PKD1-211ENST00000474088 TTC23LQ6PF05 361 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 CCDC89Q8N998 374 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 ZUFSPQ96AP4 578 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 RAD51AP1Q96B01 352 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 RAB11FIP5Q9BXF6 653 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 SLC26A1Q9H2B4 701 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 SLC6A20Q9NP91 592 aa23.77■■□□□ 1.4
PKD1-211ENST00000474088 COPG1Q9Y678 874 aaKnown RBP23.77■■□□□ 1.4
PKD1-211ENST00000474088 A1L4Q6 167 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 TARM1B6A8C7 271 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 SNRNP200O75643 2136 aaKnown RBP23.76■■□□□ 1.39
PKD1-211ENST00000474088 FKBP9O95302 570 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 ITGA3P26006 1051 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 COX15Q7KZN9 410 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 UBE2Q2Q8WVN8 375 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.76■■□□□ 1.39
PKD1-211ENST00000474088 ZNF285Q96NJ3 590 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 PANX3Q96QZ0 392 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 SPSB2Q99619 263 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 P2RY12Q9H244 342 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 ERRFI1Q9UJM3 462 aaPredicted RBP23.76■■□□□ 1.39
PKD1-211ENST00000474088 CDC23Q9UJX2 597 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 FBXL4Q9UKA2 621 aa23.76■■□□□ 1.39
PKD1-211ENST00000474088 WIPF3A6NGB9 483 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 SOCS6O14544 535 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 ZSCAN5DPP0CG00 497 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 RPL22P35268 128 aaKnown RBP23.75■■□□□ 1.39
PKD1-211ENST00000474088 GLRBP48167 497 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 FAM214AQ32MH5 1076 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 PRAMEF13Q5VWM6 474 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 CUZD1Q86UP6 607 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 TTC29Q8NA56 475 aaPredicted RBP23.75■■□□□ 1.39
PKD1-211ENST00000474088 GSDMBQ8TAX9 411 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 BARD1Q99728 777 aaKnown RBP23.75■■□□□ 1.39
PKD1-211ENST00000474088 SELENOSQ9BQE4 189 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 TREX1Q9NSU2 369 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 TTC7AQ9ULT0 858 aaPredicted RBP23.75■■□□□ 1.39
PKD1-211ENST00000474088 ICE1Q9Y2F5 2266 aa23.75■■□□□ 1.39
PKD1-211ENST00000474088 KPNA5O15131 536 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 ALOX12BO75342 701 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 C1orf105O95561 183 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 SESN2P58004 480 aaPredicted RBP23.74■■□□□ 1.39
PKD1-211ENST00000474088 MRM3Q9HC36 420 aaKnown RBP23.74■■□□□ 1.39
PKD1-211ENST00000474088 IL1RAPL1Q9NZN1 696 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 GNPTGQ9UJJ9 305 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 PCDHGA10Q9Y5H3 936 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 MRFAP1Q9Y605 127 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 HS3ST3B1Q9Y662 390 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 NFS1Q9Y697 457 aa23.74■■□□□ 1.39
PKD1-211ENST00000474088 FITM1A5D6W6 292 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 ANKUB1A6NFN9 424 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 SRPX2O60687 465 aaPredicted RBP23.73■■□□□ 1.39
PKD1-211ENST00000474088 CTSVO60911 334 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 NDUFS3O75489 264 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 RPS3P23396 243 aaKnown RBP eCLIP23.73■■□□□ 1.39
PKD1-211ENST00000474088 OR1D4P47884 311 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 CRADDP78560 199 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 CCSMST1Q4G0I0 132 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 KIRREL2Q6UWL6 708 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 SHISA6Q6ZSJ9 500 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 OTOAQ7RTW8 1153 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 LRRC6Q86X45 466 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 MPP5Q8N3R9 675 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 RAB42Q8N4Z0 105 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 HMGCLL1Q8TB92 370 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 SKA2Q8WVK7 121 aaPredicted RBP23.73■■□□□ 1.39
PKD1-211ENST00000474088 WDR77Q9BQA1 342 aaPredicted RBP23.73■■□□□ 1.39
PKD1-211ENST00000474088 SOX17Q9H6I2 414 aaPredicted RBP23.73■■□□□ 1.39
PKD1-211ENST00000474088 EIF2B3Q9NR50 452 aaKnown RBP23.73■■□□□ 1.39
PKD1-211ENST00000474088 NXT1Q9UKK6 140 aaKnown RBP23.73■■□□□ 1.39
PKD1-211ENST00000474088 GUCA1BQ9UMX6 200 aa23.73■■□□□ 1.39
PKD1-211ENST00000474088 NTNG1Q9Y2I2 539 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms