RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ERVK-19Q9WJR5 959 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 HSPB11Q9Y547 144 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PEX16Q9Y5Y5 336 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 U3KQ87 197 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TRIM24O15164 1050 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 INPPL1O15357 1258 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 IPO13O94829 963 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 DHFRP00374 187 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 IFNA7P01567 189 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ANXA1P04083 346 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TCF4P15884 667 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 NR2F2P24468 414 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GTF2E2P29084 291 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ADORA2AP29274 412 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 RPS9P46781 194 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GABRB2P47870 512 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ARSEP51690 589 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GP2P55259 537 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 RAB4BP61018 213 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TIMM10P62072 90 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GPS1Q13098 491 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 KCNAB1Q14722 419 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 LLGL1Q15334 1064 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM214AQ32MH5 1076 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TPRG1LQ5T0D9 272 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GPR158Q5T848 1215 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SULT1C3Q6IMI6 304 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SPOCD1Q6ZMY3 1216 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CDHR3Q6ZTQ4 885 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 RTL10Q7L3V2 364 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 STRADAQ7RTN6 431 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SNX20Q7Z614 316 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 RASAL3Q86YV0 1011 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 NLGN4XQ8N0W4 816 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 OR8H3Q8N146 312 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 KLHL36Q8N4N3 616 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 AMER2Q8N7J2 671 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PPM1NQ8N819 430 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GDPD1Q8N9F7 314 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ATG16L2Q8NAA4 619 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ASZ1Q8WWH4 475 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GTF3AQ92664 365 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 RAD54LQ92698 747 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 USP13Q92995 863 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FUBP1Q96AE4 644 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 NXPE2Q96DL1 559 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 YIPF6Q96EC8 236 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SIPA1Q96FS4 1042 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 VPS39Q96JC1 886 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GPR137Q96N19 417 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 MBOAT7Q96N66 472 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM213AQ9BRX8 229 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM83DQ9H4H8 585 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PCDH9Q9HC56 1237 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 STARD7Q9NQZ5 370 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 UFSP2Q9NUQ7 469 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 DNAJC11Q9NVH1 559 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SLAMF8Q9P0V8 285 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CTSFQ9UBX1 484 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 EVLQ9UI08 416 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 DRG1Q9Y295 367 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ANKRD6Q9Y2G4 727 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC22A7Q9Y694 548 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ROBO3Q96MS0 1386 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 COL11A2P13942 1736 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 CCDC154A6NI56 674 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 AQP12BA6NM10 295 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 SNAP23O00161 211 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 AP3D1O14617 1153 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 PCDH17O14917 1159 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 TIPRLO75663 272 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 S100A8P05109 93 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 ACVR2AP27037 513 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 IL1R2P27930 398 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 MSX2P35548 267 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 SPAM1P38567 509 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 PCP4P48539 62 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 ARPP19P56211 112 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 MVKQ03426 396 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 CHRNDQ07001 517 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 NFIXQ14938 502 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 SEC23AQ15436 765 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 KNOP1Q1ED39 458 aaKnown RBP5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 COL28A1Q2UY09 1125 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 GPR33Q49SQ1 333 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 BCL7AQ4VC05 210 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 LRRC24Q50LG9 513 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 FASTKD1Q53R41 847 aaKnown RBP5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 TCTE1Q5JU00 501 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 SPANXN2Q5MJ10 180 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 AADACL4Q5VUY2 407 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 GPR139Q6DWJ6 353 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 ELP2Q6IA86 826 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 LAMTOR1Q6IAA8 161 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 TAF2Q6P1X5 1199 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 R3HCC1LQ7Z5L2 792 aaKnown RBP5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 AQP12AQ8IXF9 295 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 CLEC4FQ8N1N0 589 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 UBE2J2Q8N2K1 259 aa5.01□□□□□ -1.61
TMEM39A-206ENST00000473684 OR52K2Q8NGK3 314 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms