RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 IPCEF1Q8WWN9 437 aaPredicted RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 SLC38A4Q969I6 547 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 L3HYPDHQ96EM0 354 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 RNF170Q96K19 258 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 HEXIM2Q96MH2 286 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 ASB16Q96NS5 453 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 SEPHS2Q99611 448 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 KIFC1Q9BW19 673 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 MRPL4Q9BYD3 311 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 AMBRA1Q9C0C7 1298 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 NUAK2Q9H093 628 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 SLC52A3Q9NQ40 469 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 FAM49BQ9NUQ9 324 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 PIH1D1Q9NWS0 290 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 FBXL12Q9NXK8 326 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 ERVW-1Q9UQF0 538 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 TRAPPC4Q9Y296 219 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 ORC6Q9Y5N6 252 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 PIAS3Q9Y6X2 628 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 C1QTNF9BB2RNN3 333 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PTGES3LE9PB15 166 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 UGT2B17O75795 530 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 TSPAN9O75954 239 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ANGPTL1O95841 491 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 CYP11A1P05108 521 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 THP07101 528 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ANXA6P08133 673 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 C1QTNF9P0C862 333 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 IL7P13232 177 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ALOX12P18054 663 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 AGXTP21549 392 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 IL32P24001 234 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 HRH2P25021 359 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 YWHAQP27348 245 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ABCG1P45844 678 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 CLK1P49759 484 aaKnown RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 EFNA5P52803 228 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 LIMK1P53667 647 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 UGT2B15P54855 530 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 SLC12A2P55011 1212 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 KCNK10P57789 538 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 LSM3P62310 102 aaKnown RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 PIGFQ07326 219 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 RIPPLY1Q0D2K3 151 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 KCNAB2Q13303 367 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 GPR50Q13585 617 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PAFAH1B3Q15102 231 aaKnown RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 RPS6KA2Q15349 733 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ESCO2Q56NI9 601 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 KCTD11Q693B1 232 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 SULT1C3Q6IMI6 304 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 Q6ZS52 159 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PDZD4Q76G19 769 aaPredicted RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 PLCZ1Q86YW0 608 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 SPEM1Q8N4L4 309 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 CELF2-AS1Q8N7Q2 184 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 KBTBD8Q8NFY9 601 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 OR5K1Q8NHB7 308 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 UBA3Q8TBC4 463 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 HEXDCQ8WVB3 486 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PEX13Q92968 403 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ZFYVE19Q96K21 471 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 LGMNQ99538 433 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 OMDQ99983 421 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 IER2Q9BTL4 223 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 TRAF4Q9BUZ4 470 aaPredicted RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 LRRC3Q9BY71 257 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 CEP41Q9BYV8 373 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ARRDC1-AS1Q9H2J1 176 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 GSTO2Q9H4Y5 243 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 AKTIPQ9H8T0 292 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PAQR5Q9NXK6 330 aaPredicted RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 EHD3Q9NZN3 535 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 KLHL8Q9P2G9 620 aaPredicted RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 ZMIZ1Q9ULJ6 1067 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 BTBD3Q9Y2F9 522 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PCDHGB6Q9Y5F9 930 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PCDHGB2Q9Y5G2 931 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 FRYQ5TBA9 3013 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 TICRRQ7Z2Z1 1910 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 FAM208BQ5VWN6 2430 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 F5H423 210 aaPredicted RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 ARNTLO00327 626 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 BET1O15155 118 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PDPK1O15530 556 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 RGS10O43665 173 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 MFSD11O43934 449 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 AHSGP02765 367 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 NCK1P16333 377 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 GJA1P17302 382 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 SAT1P21673 171 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 PSMB9P28065 219 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ERP29P30040 261 aaKnown RBP9.86□□□□□ -0.83
APTX-216ENST00000472896 AVPR1AP37288 418 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 TNFSF9P41273 254 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 SOX9P48436 509 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 CSNK2BP67870 215 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 SLC35A2P78381 396 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 INCA1Q0VD86 236 aa9.86□□□□□ -0.83
APTX-216ENST00000472896 ELAVL2Q12926 359 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms