RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RAB28P51157 221 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 DCDP81605 110 aaKnown RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 CCNG2Q16589 344 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 SLC5A12Q1EHB4 618 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 ACSBG2Q5FVE4 666 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 CRB2Q5IJ48 1285 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 PCID2Q5JVF3 399 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 DCAF10Q5QP82 559 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 ZNF549Q6P9A3 640 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 AFTPHQ6ULP2 937 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 CENPUQ71F23 418 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 LAPTM4BQ86VI4 370 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 CAND1Q86VP6 1230 aaKnown RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 PRSS58Q8IYP2 241 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 FAM26EQ8N5C1 309 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 LPGAT1Q92604 370 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 SNRNP40Q96DI7 357 aaKnown RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 MIPEPQ99797 713 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 ACAT2Q9BWD1 397 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 SOX17Q9H6I2 414 aaPredicted RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 CATSPERZQ9NTU4 200 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 ASF1BQ9NVP2 202 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 P4HTMQ9NXG6 502 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 CTSFQ9UBX1 484 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 RIMKLBQ9ULI2 386 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 PLCL2Q9UPR0 1127 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 DRG1Q9Y295 367 aaKnown RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 CRYL1Q9Y2S2 319 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 MED16Q9Y2X0 877 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 PCDHGA9Q9Y5G4 932 aaKnown RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 APCP25054 2843 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 TEP1Q99973 2627 aaKnown RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 ESPL1Q14674 2120 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 FBN2P35556 2912 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 IGKV1-8A0A0C4DH67 115 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 A0A0J9YVX5 310 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 A1L4Q6 167 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 OR2W5A6NFC9 320 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 E7EVH7 732 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 GOLGA8MH3BSY2 632 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 MATN2O00339 956 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 PRMT5O14744 637 aaPredicted RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 RASGRF2O14827 1237 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 CEP104O60308 925 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 BANF1O75531 89 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 CELA2AP08217 269 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 EIF3BP55884 814 aaKnown RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 VSX2P58304 361 aaPredicted RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 BASP1P80723 227 aaKnown RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 CCZ1BP86790 482 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 CCZ1P86791 482 aaPredicted RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 TIAL1Q01085 375 aaKnown RBP eCLIP7.74□□□□□ -1.17
USP48-207ENST00000471752 KCNJ11Q14654 390 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 SSPNQ14714 243 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 KIR2DS3Q14952 304 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 SF1Q15637 639 aaKnown RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 NKG7Q16617 165 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 HIF1AQ16665 826 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 WASHC2DQ5SRD0 308 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 SEL1L2Q5TEA6 688 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 CNSTQ6PJW8 725 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 SUSD1Q6UWL2 747 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 KIRREL2Q6UWL6 708 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 CUZD1Q86UP6 607 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 PLD3Q8IV08 490 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 PARP9Q8IXQ6 854 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 GPR135Q8IZ08 494 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 GALNT16Q8N428 558 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 PPFIBP2Q8ND30 876 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 OR2A1Q8NGT9 310 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 OR2Y1Q8NGV0 311 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 OR2L8Q8NGY9 312 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 GIMAP7Q8NHV1 300 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.74□□□□□ -1.17
USP48-207ENST00000471752 C8orf44Q96CB5 159 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 ZNF285Q96NJ3 590 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 PPP1R2P1Q96PQ5 205 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 SPSB2Q99619 263 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 SMAD5Q99717 465 aaKnown RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 MACROD1Q9BQ69 325 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 KIFC1Q9BW19 673 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 SLC7A5P2Q9GIP4 190 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 VPS37BQ9H9H4 285 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 FANCEQ9HB96 536 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 SLC6A20Q9NP91 592 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 PAK5Q9P286 719 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 IFT80Q9P2H3 777 aaPredicted RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 NDOR1Q9UHB4 597 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 POLG2Q9UHN1 485 aa7.74□□□□□ -1.17
USP48-207ENST00000471752 MRPS2Q9Y399 296 aaKnown RBP7.74□□□□□ -1.17
USP48-207ENST00000471752 AKAP9Q99996 3911 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 ERI2A8K979 691 aaKnown RBP7.73□□□□□ -1.17
USP48-207ENST00000471752 ARHGEF33A8MVX0 844 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 KLHL18O94889 574 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CBX6O95503 412 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 S1PR4O95977 384 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 GP1BBP13224 206 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 AGXTP21549 392 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 PRAMEP78395 509 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms