RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PRR23CQ6ZRP0 262 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 TEX9Q8N6V9 391 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 OR2L8Q8NGY9 312 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 PPP1R14CQ8TAE6 165 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 OR4K3Q96R72 315 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 C20orf27Q9GZN8 174 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 SRMSQ9H3Y6 488 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 GSTO2Q9H4Y5 243 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 MANSC1Q9H8J5 431 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 ZBTB26Q9HCK0 441 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 HCN4Q9Y3Q4 1203 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 OTOGLQ3ZCN5 2332 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 OR6C74A6NCV1 312 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 RHPN2P1A8MT19 583 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 PROB1E7EW31 1015 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 ITM2AO43736 263 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 LRP3O75074 770 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 LYPLA1O75608 230 aaPredicted RBP18.57■□□□□ 0.56
PSPC1-203ENST00000471658 TYRP1P17643 537 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 PSMB5P28074 263 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 PEBP1P30086 187 aaKnown RBP18.57■□□□□ 0.56
PSPC1-203ENST00000471658 SHMT2P34897 504 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 ARHGAP19Q14CB8 494 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 SUZ12Q15022 739 aaKnown RBP18.57■□□□□ 0.56
PSPC1-203ENST00000471658 ASCL5Q7RTU5 278 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 THOC6Q86W42 341 aaKnown RBP18.57■□□□□ 0.56
PSPC1-203ENST00000471658 RBM12BQ8IXT5 1001 aaKnown RBP18.57■□□□□ 0.56
PSPC1-203ENST00000471658 ADGRF3Q8IZF5 1079 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 FAM181AQ8N9Y4 354 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 ZNF483Q8TF39 744 aaPredicted RBP18.57■□□□□ 0.56
PSPC1-203ENST00000471658 SLC38A3Q99624 504 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 ACAT2Q9BWD1 397 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 C1QTNF3Q9BXJ4 246 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 SHCBP1LQ9BZQ2 653 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 SLC32A1Q9H598 525 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 STN1Q9H668 368 aaKnown RBP18.57■□□□□ 0.56
PSPC1-203ENST00000471658 TMEM9BQ9NQ34 198 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 OPTCQ9UBM4 332 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 PCDHGB2Q9Y5G2 931 aa18.57■□□□□ 0.56
PSPC1-203ENST00000471658 TNPO3Q9Y5L0 923 aaKnown RBP18.57■□□□□ 0.56
PSPC1-203ENST00000471658 C4orf47A7E2U8 309 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 K7EPI3 171 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SERPINE1P05121 402 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 CD59P13987 128 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 EPORP19235 508 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 POLR2CP19387 275 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 HSD17B2P37059 387 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 BST1Q10588 318 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 NR0B2Q15466 257 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 AASDHQ4L235 1098 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 CFAP157Q5JU67 520 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 GUSBP11Q6P575 273 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 GOLGA7Q7Z5G4 137 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 FAM20CQ8IXL6 584 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 KLHDC8AQ8IYD2 350 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 LSMEM2Q8N112 164 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 RAB42Q8N4Z0 105 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 OR10G6Q8NH81 332 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 TRPC4APQ8TEL6 797 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 PPP4R1Q8TF05 950 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SETD7Q8WTS6 366 aaKnown RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SMPDL3AQ92484 453 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SGPP1Q9BX95 441 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SEMA4BQ9NPR2 832 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SH2B3Q9UQQ2 575 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 A0A1B0GTL3 188 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 CPED1A4D0V7 1026 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 KDM1AO60341 852 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 CHRNGP07510 517 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 CHRM5P08912 532 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 GLB1P16278 677 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 NPPBP16860 134 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 OR1D5P58170 312 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 NHLH1Q02575 133 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 CLCQ05315 142 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 STX3Q13277 289 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 GTF2H2Q13888 395 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 PROX2Q3B8N5 592 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 CAPN13Q6MZZ7 669 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 GTF2H2CQ6P1K8 395 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 ZNF438Q7Z4V0 828 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 Q8N9G6 341 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SNX31Q8N9S9 440 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 AVL9Q8NBF6 648 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 HMGCLL1Q8TB92 370 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SREK1Q8WXA9 508 aaKnown RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 RSC1A1Q92681 617 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 SH3KBP1Q96B97 665 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 MAGEB18Q96M61 343 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 RAB11FIP5Q9BXF6 653 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 UCK1Q9HA47 277 aa18.56■□□□□ 0.56
PSPC1-203ENST00000471658 CCDC177Q9NQR7 707 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-203ENST00000471658 UBFD1O14562 309 aaKnown RBP18.55■□□□□ 0.56
PSPC1-203ENST00000471658 B4GAT1O43505 415 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 NUDT21O43809 227 aaKnown RBP18.55■□□□□ 0.56
PSPC1-203ENST00000471658 PRICKLE3O43900 615 aaPredicted RBP18.55■□□□□ 0.56
PSPC1-203ENST00000471658 SH3BP5O60239 455 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 ALDH4A1P30038 563 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 ASPHQ12797 758 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 PERM1Q5SV97 790 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms