RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 PTPN3P26045 913 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 CDC25CP30307 473 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 SLC15A1P46059 708 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 MTF1Q14872 753 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 PDLIM3Q53GG5 364 aaPredicted RBP3.08□□□□□ -1.92
RBM39-228ENST00000471635 TEX38Q6PEX7 206 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 CEP57Q86XR8 500 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 C1orf131Q8NDD1 294 aaKnown RBP3.08□□□□□ -1.92
RBM39-228ENST00000471635 ZPLD1Q8TCW7 415 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 GATAD1Q8WUU5 269 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 AGAP4Q96P64 663 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 MED20Q9H944 212 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 GKN1Q9NS71 199 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 FER1L5A0AVI2 2057 aa3.08□□□□□ -1.92
RBM39-228ENST00000471635 ASB14A6NK59 587 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 C2orf81A6NN90 581 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 B4DLN1 442 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 BCL2L11O43521 198 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 TSPAN1O60635 241 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 IGKV3-15P01624 115 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 OR2T7P0C7T2 308 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 GJA1P17302 382 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 SLC9A3P48764 834 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 MRPL12P52815 198 aaKnown RBP3.07□□□□□ -1.92
RBM39-228ENST00000471635 CSNK2BP67870 215 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 AIMP2Q13155 320 aaKnown RBP3.07□□□□□ -1.92
RBM39-228ENST00000471635 MTHFSDQ2M296 383 aaKnown RBP3.07□□□□□ -1.92
RBM39-228ENST00000471635 DHRS7BQ6IAN0 325 aaPredicted RBP3.07□□□□□ -1.92
RBM39-228ENST00000471635 G2E3Q7L622 706 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 ADIPOR2Q86V24 386 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 SLC47A2Q86VL8 602 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 CATSPERDQ86XM0 798 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 EXOC8Q8IYI6 725 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 C11orf45Q8TAV5 145 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 CCDC34Q96HJ3 373 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 SLC45A3Q96JT2 553 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 CDRT15Q96T59 188 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 PAFAH2Q99487 392 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 OLFM1Q99784 485 aa3.07□□□□□ -1.92
RBM39-228ENST00000471635 NKX3-1Q99801 234 aaPredicted RBP3.07□□□□□ -1.92
RBM39-228ENST00000471635 ACOD1A6NK06 481 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 SRRM5B3KS81 715 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 AP3D1O14617 1153 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 MEIS2O14770 477 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 TRUB2O95900 331 aaKnown RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 VTNP04004 478 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 KRTAP1-4P0C5Y4 121 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 SMIM18P0DKX4 95 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 TSFMP43897 325 aaKnown RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 PNLIPRP2P54317 469 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 ARF3P61204 181 aaPredicted RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 DCAF7P61962 342 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 ARF1P84077 181 aaKnown RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 CCDC30Q5VVM6 783 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 CES4AQ5XG92 561 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 FAAH2Q6GMR7 532 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 TBC1D1Q86TI0 1168 aaPredicted RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 TMEM173Q86WV6 379 aaPredicted RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 APOBEC4Q8WW27 367 aaKnown RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 DHX58Q96C10 678 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 FAM49AQ9H0Q0 323 aaPredicted RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 ZNF644Q9H582 1327 aaPredicted RBP3.06□□□□□ -1.92
RBM39-228ENST00000471635 NDE1Q9NXR1 346 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 NME7Q9Y5B8 376 aa3.06□□□□□ -1.92
RBM39-228ENST00000471635 ZNF541Q9H0D2 1346 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 CTDSP2O14595 271 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 VILLO15195 856 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 PTP4A3O75365 173 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 BCL10O95999 233 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 THEGLP0DJG4 465 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 HLA-FP30511 346 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 CSTF2P33240 577 aaKnown RBP eCLIP3.05□□□□□ -1.923e-13■■□□□ 11.6
RBM39-228ENST00000471635 XGP55808 180 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 ZFP36L1Q07352 338 aaKnown RBP3.05□□□□□ -1.92
RBM39-228ENST00000471635 EFTUD2Q15029 972 aaKnown RBP eCLIP3.05□□□□□ -1.923e-10■□□□□ 10
RBM39-228ENST00000471635 ZNF74Q16587 644 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 HIGD2BQ4VC39 106 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 RAB41Q5JT25 222 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 SLC35D3Q5M8T2 416 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 UGT3A1Q6NUS8 523 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 FRRS1Q6ZNA5 592 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 NUDT13Q86X67 352 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 METTL4Q8N3J2 472 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 LRRC15Q8TF66 581 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 CHPT1Q8WUD6 406 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 SSMEM1Q8WWF3 244 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 HDAC2Q92769 488 aaKnown RBP3.05□□□□□ -1.92
RBM39-228ENST00000471635 PDLIM5Q96HC4 596 aaKnown RBP3.05□□□□□ -1.92
RBM39-228ENST00000471635 GNB4Q9HAV0 340 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 Q9N2K0 584 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 WSB2Q9NYS7 404 aaPredicted RBP3.05□□□□□ -1.92
RBM39-228ENST00000471635 C19orf25Q9UFG5 118 aaPredicted RBP3.05□□□□□ -1.92
RBM39-228ENST00000471635 TRIM17Q9Y577 477 aa3.05□□□□□ -1.92
RBM39-228ENST00000471635 FEZF1A0PJY2 475 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 OR2A25A4D2G3 310 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 F5H0A9 414 aaPredicted RBP3.04□□□□□ -1.92
RBM39-228ENST00000471635 EPB41L2O43491 1005 aaKnown RBP3.04□□□□□ -1.92
RBM39-228ENST00000471635 CA9Q16790 459 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 IGSF11Q5DX21 431 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 GORABQ5T7V8 394 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms