RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 IGHV5-10-1A0A0J9YXX1 117 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 PIPSLA2A3N6 862 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 GSAPA4D1B5 854 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 SUPT3HB4E1H0 165 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 TARM1B6A8C7 271 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 MAP2K7O14733 419 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 SPAG7O75391 227 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 SUPT3HO75486 399 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 C9P02748 559 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 HIST1H2AGP0C0S8 130 aaPredicted RBP14.29□□□□□ -0.12
COL9A3-209ENST00000469852 UGT2B7P16662 529 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 HIST1H2ADP20671 130 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 AP1S2P56377 157 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 TBPL1P62380 186 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 CDKL1Q00532 357 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 E2F1Q01094 437 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 SPIDRQ14159 915 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 TSNAXIP1Q2TAA8 658 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 N4BP2L1Q5TBK1 243 aaPredicted RBP14.29□□□□□ -0.12
COL9A3-209ENST00000469852 HES3Q5TGS1 186 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 WDR74Q6RFH5 385 aaPredicted RBP14.29□□□□□ -0.12
COL9A3-209ENST00000469852 FAM92BQ6ZTR7 304 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 EXOC3L1Q86VI1 746 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 SLITRK4Q8IW52 837 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 SYTL1Q8IYJ3 562 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 BANPQ8N9N5 519 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 ESAMQ96AP7 390 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 ARL8AQ96BM9 186 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 PYCR2Q96C36 320 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 RHBDF1Q96CC6 855 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 PGM2Q96G03 612 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 HIST1H2AHQ96KK5 128 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 HIST1H2AJQ99878 128 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 EGFL8Q99944 293 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 H2AFJQ9BTM1 129 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 RAB11FIP5Q9BXF6 653 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 TRIM54Q9BYV2 358 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 RAB33BQ9H082 229 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 ZMYND15Q9H091 742 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 EPB41L1Q9H4G0 881 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 TMBIM4Q9HC24 238 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 ABCF3Q9NUQ8 709 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 CD274Q9NZQ7 290 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 EPHA6Q9UF33 1036 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 POMT2Q9UKY4 750 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 ASB1Q9Y576 335 aa14.29□□□□□ -0.12
COL9A3-209ENST00000469852 USP24Q9UPU5 2620 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 LRRC14BA6NHZ5 514 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 ISM1B1AKI9 464 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 AGRPO00253 132 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 COPEO14579 308 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 KDM1AO60341 852 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 GSTA1P08263 222 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 MYZAPP0CAP1 466 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 PVRP15151 417 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 PRDX3P30048 256 aaKnown RBP14.28□□□□□ -0.12
COL9A3-209ENST00000469852 CRHR1P34998 444 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 GDF5P43026 501 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 NAE1Q13564 534 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 TSTA3Q13630 321 aaPredicted RBP14.28□□□□□ -0.12
COL9A3-209ENST00000469852 ARHGAP19Q14CB8 494 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 PCM1Q15154 2024 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 ST3GAL2Q16842 350 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 KIF26BQ2KJY2 2108 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 SNAP47Q5SQN1 464 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 KLC3Q6P597 504 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 TMEM71Q6P5X7 295 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 KLHL35Q6PF15 583 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 PDPRQ8NCN5 879 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 RCBTB1Q8NDN9 531 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 ALKBH8Q96BT7 664 aaKnown RBP14.28□□□□□ -0.12
COL9A3-209ENST00000469852 MED8Q96G25 268 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 APOPT1Q96IL0 206 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 CCDC74BQ96LY2 380 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 RUFY1Q96T51 708 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 MAP3K3Q99759 626 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 ACAT2Q9BWD1 397 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 KLHL25Q9H0H3 589 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 VIPAS39Q9H9C1 493 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 INTS7Q9NVH2 962 aaKnown RBP14.28□□□□□ -0.12
COL9A3-209ENST00000469852 NUDT4Q9NZJ9 180 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 LNPEPQ9UIQ6 1025 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 SH2B3Q9UQQ2 575 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 KLHL20Q9Y2M5 609 aa14.28□□□□□ -0.12
COL9A3-209ENST00000469852 IGHV5-51A0A0C4DH38 117 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 A8MU76 341 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 C2orf74A8MZ97 194 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 ZW10O43264 779 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 KLK8O60259 260 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 PRAMEF10O60809 474 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 GLRA3O75311 464 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 MT-CO3P00414 261 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 PROCP04070 461 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 ANXA5P08758 320 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 RBP1P09455 135 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 THRAP10827 490 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 SLC6A12P48065 614 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 AGTR2P50052 363 aa14.27□□□□□ -0.13
COL9A3-209ENST00000469852 ZFP36L1Q07352 338 aaKnown RBP14.27□□□□□ -0.13
COL9A3-209ENST00000469852 PRKAA1Q13131 559 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms