RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 DAPK2Q9UIK4 370 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 TMED3Q9Y3Q3 217 aa4.71□□□□□ -1.66
LSM5-209ENST00000468872 LINC01565O15544 149 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 INHBAP08476 426 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 CASTP20810 708 aaKnown RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 EPHA2P29317 976 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 PDX1P52945 283 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 DVL1P1P54792 670 aaPredicted RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 DLK1P80370 383 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 POU3F1Q03052 451 aaPredicted RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 UGCGQ16739 394 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 UGT3A2Q3SY77 523 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 ZNF672Q499Z4 452 aaPredicted RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 SFMBT2Q5VUG0 894 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 SHEQ5VZ18 495 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 ZNF771Q7L3S4 317 aaPredicted RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 PLD3Q8IV08 490 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 TMEM139Q8IV31 216 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 CIARTQ8N365 385 aaPredicted RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 SLC24A4Q8NFF2 622 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 OR11H4Q8NGC9 324 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 OR13A1Q8NGR1 328 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 OR1J1Q8NGS3 322 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 GDAP1Q8TB36 358 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 CD101Q93033 1021 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 SLC47A1Q96FL8 570 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 SCRN2Q96FV2 425 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 THOC1Q96FV9 657 aaKnown RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 INPP5KQ9BT40 448 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 GTPBP2Q9BX10 602 aaKnown RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 SLC2A11Q9BYW1 496 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 Q9H8V8 135 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 ZBTB20Q9HC78 741 aaPredicted RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 SLC7A7Q9UM01 511 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 FAF1Q9UNN5 650 aaPredicted RBP4.7□□□□□ -1.66
LSM5-209ENST00000468872 WDR83OSQ9Y284 106 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 JRKLQ9Y4A0 524 aa4.7□□□□□ -1.66
LSM5-209ENST00000468872 IQSEC2Q5JU85 1478 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 SMARCA4P51532 1647 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 SCN5AQ14524 2016 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 H0YAE9 185 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 DNM1LO00429 736 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 PSMA7O14818 248 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 PRKNO60260 465 aaPredicted RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 PLGP00747 810 aaPredicted RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 SUPT20HL2P0C7V6 817 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 CETPP11597 493 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 MARK3P27448 753 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 MNDAP41218 407 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 GMPSP49915 693 aaPredicted RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 CLDN15P56746 228 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 GSDMDP57764 484 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 PTENP60484 403 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 RRS1Q15050 365 aaKnown RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 E2F5Q15329 346 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 NPTX1Q15818 432 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 ITPRIPL2Q3MIP1 535 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 NHSL2Q5HYW2 709 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 WBP2NLQ6ICG8 309 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 ENPP7Q6UWV6 458 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 TMEM182Q6ZP80 229 aaPredicted RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 MSANTD1Q6ZTZ1 278 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 C9orf139Q6ZV77 190 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 ZNF554Q86TJ5 538 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 NFE4Q86UQ8 179 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 EXOC3L1Q86VI1 746 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 NUDT13Q86X67 352 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 TIGD4Q8IY51 512 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 MAB21L3Q8N8X9 362 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 HEXDCQ8WVB3 486 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 HSD17B8Q92506 261 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 ST6GALNAC6Q969X2 333 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 EXOC4Q96A65 974 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 ST6GAL2Q96JF0 529 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 FAM20AQ96MK3 541 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 C2orf40Q9H1Z8 148 aa4.69□□□□□ -1.66
LSM5-209ENST00000468872 TFB2MQ9H5Q4 396 aaKnown RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 COPS7BQ9H9Q2 264 aaPredicted RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 ARGLU1Q9NWB6 273 aaPredicted RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 DDX43Q9NXZ2 648 aaKnown RBP4.69□□□□□ -1.66
LSM5-209ENST00000468872 HEG1Q9ULI3 1381 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 A4D1N5 150 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 C5orf52A6NGY3 159 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 CASTOR2A6NHX0 329 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 PLOD2O00469 737 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 ATP6AP2O75787 350 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 GAS8-AS1O95177 125 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 MOCS3O95396 460 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 GSRP00390 522 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 NR3C1P04150 777 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 FGF5P12034 268 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 ATP5DP30049 168 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 NR2C2P49116 596 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 CDH11P55287 796 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 DLX5P56178 289 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 LGALS3BPQ08380 585 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 NFE2L1Q14494 772 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 UGP2Q16851 508 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms