RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RLN3Q8WXF3 142 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 UTP4Q969X6 686 aaKnown RBP18.4■□□□□ 0.54
SMC4-209ENST00000468653 BIRC7Q96CA5 298 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 MTFMTQ96DP5 389 aaKnown RBP18.4■□□□□ 0.54
SMC4-209ENST00000468653 PDXPQ96GD0 296 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 OR4K3Q96R72 315 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 FERD3LQ96RJ6 166 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 CCDC167Q9P0B6 97 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 PLAGL1Q9UM63 463 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 DMTF1Q9Y222 760 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 WDR37Q9Y2I8 494 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 KCNE1BA0A087WTH5 132 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 PDZK1P1A8MUH7 402 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 C10orf142B7Z368 130 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 E7EQ34 232 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 TOR1BO14657 336 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 PRAMEF4O60810 478 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 IRX1P78414 480 aaPredicted RBP18.4■□□□□ 0.54
SMC4-209ENST00000468653 PTK2BQ14289 1009 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 PRAMEF9Q5VWM5 478 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 GK5Q6ZS86 529 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 Q6ZSR6 202 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 UBALD2Q8IYN6 164 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 TBC1D21Q8IYX1 336 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 TMEM145Q8NBT3 493 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 SELENOMQ8WWX9 145 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 USP7Q93009 1102 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 TSACCQ96A04 125 aaPredicted RBP18.4■□□□□ 0.54
SMC4-209ENST00000468653 PPP3R2Q96LZ3 170 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 IL17FQ96PD4 163 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 INSM2Q96T92 566 aaPredicted RBP18.4■□□□□ 0.54
SMC4-209ENST00000468653 GPRC5BQ9NZH0 403 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 DYRK1BQ9Y463 629 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 C19orf67A6NJJ6 358 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 E7ENX8 843 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 TNFRSF10CO14798 259 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 AIM2O14862 343 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 LSM1O15116 133 aaKnown RBP18.39■□□□□ 0.53
SMC4-209ENST00000468653 WFS1O76024 890 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 JUPP14923 745 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 GNAZP19086 355 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 GPX3P22352 226 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 PGM1P36871 562 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 RABIFP47224 123 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 NME5P56597 212 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 ELF3P78545 371 aaPredicted RBP18.39■□□□□ 0.53
SMC4-209ENST00000468653 SLC25A3Q00325 362 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 TAP2Q03519 686 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 KRT33BQ14525 404 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 AP5B1Q2VPB7 878 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 TPRG1LQ5T0D9 272 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 PAOXQ6QHF9 649 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 TRIM46Q7Z4K8 759 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 ARHGAP24Q8N264 748 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 FRMD1Q8N878 549 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 SNX19Q92543 992 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 C1orf50Q9BV19 199 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 SGPP1Q9BX95 441 aa18.39■□□□□ 0.53
SMC4-209ENST00000468653 CCDC177Q9NQR7 707 aaPredicted RBP18.39■□□□□ 0.53
SMC4-209ENST00000468653 IMP3Q9NV31 184 aaKnown RBP18.39■□□□□ 0.53
SMC4-209ENST00000468653 IGHV1OR15-9A0A0B4J2B8 117 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 PRR19A6NJB7 356 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 PDYNP01213 254 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 NUDT1P36639 197 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 HSD17B2P37059 387 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 ACADVLP49748 655 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 DIO3P55073 304 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 DOC2AQ14183 400 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 THEMIS2Q5TEJ8 643 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 DUS1LQ6P1R4 473 aaKnown RBP18.38■□□□□ 0.53
SMC4-209ENST00000468653 SUSD1Q6UWL2 747 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 SPEM1Q8N4L4 309 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 FAM160A2Q8N612 972 aaPredicted RBP18.38■□□□□ 0.53
SMC4-209ENST00000468653 LMNTD1Q8N9Z9 388 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 HMGCLL1Q8TB92 370 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 SDR39U1Q9NRG7 319 aaPredicted RBP18.38■□□□□ 0.53
SMC4-209ENST00000468653 AIG1Q9NVV5 245 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 CCL27Q9Y4X3 112 aa18.38■□□□□ 0.53
SMC4-209ENST00000468653 PI15O43692 258 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 SNRPB2P08579 225 aaKnown RBP18.37■□□□□ 0.53
SMC4-209ENST00000468653 SLC2A4P14672 509 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 NPPBP16860 134 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 CCND1P24385 295 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 CPOXP36551 454 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 HNF4AP41235 474 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 PXNP49023 591 aaPredicted RBP18.37■□□□□ 0.53
SMC4-209ENST00000468653 NEK2P51955 445 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 SRP54P61011 504 aaKnown RBP18.37■□□□□ 0.53
SMC4-209ENST00000468653 HMGCS1Q01581 520 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 EMX2Q04743 252 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 PCDH1Q08174 1060 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 ARHGAP19Q14CB8 494 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 UAP1L1Q3KQV9 507 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 FRG2Q64ET8 278 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 ABI3BPQ7Z7G0 1075 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 LRRC56Q8IYG6 542 aaPredicted RBP18.37■□□□□ 0.53
SMC4-209ENST00000468653 RGL4Q8IZJ4 473 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 PJA1Q8NG27 643 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 OR13H1Q8NG92 308 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 OR9I1Q8NGQ6 314 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms