RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 VWA5B1Q5TIE3 1220 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 HIST2H2BCQ6DN03 193 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 DRICH1Q6PGQ1 229 aaPredicted RBP23.49■■□□□ 1.35
PTCH1-210ENST00000468211 HPS6Q86YV9 775 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 GALNT16Q8N428 558 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 DTWD1Q8N5C7 304 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 DENND1AQ8TEH3 1009 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 SLC22A18Q96BI1 424 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 C19orf60Q96EN9 201 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 FER1L6-AS2Q96M78 137 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 ZNF552Q9H707 407 aaPredicted RBP23.49■■□□□ 1.35
PTCH1-210ENST00000468211 SLC39A10Q9ULF5 831 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 TCRBV7S3A2A0A539 114 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 PEX12O00623 359 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 NRP2O60462 931 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 CTSVO60911 334 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 C1orf105O95561 183 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 MGAT1P26572 445 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 EIF3BP55884 814 aaKnown RBP23.48■■□□□ 1.35
PTCH1-210ENST00000468211 MYBPC3Q14896 1274 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 FHL5Q5TD97 284 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 COX15Q7KZN9 410 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 CLEC1AQ8NC01 280 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 MFSD3Q96ES6 412 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 BIRC8Q96P09 236 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 IL22Q9GZX6 179 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 ZBTB20Q9HC78 741 aaPredicted RBP23.48■■□□□ 1.35
PTCH1-210ENST00000468211 LRRC4CQ9HCJ2 640 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 SYBUQ9NX95 663 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 C5AR2Q9P296 337 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 GNPTGQ9UJJ9 305 aa23.48■■□□□ 1.35
PTCH1-210ENST00000468211 TTC7AQ9ULT0 858 aaPredicted RBP23.48■■□□□ 1.35
PTCH1-210ENST00000468211 A0A1B0GX78 115 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 GOLGA8KD6RF30 607 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 GOLGA8TH3BQL2 631 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 NDUFS3O75489 264 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 AGFG2O95081 481 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 CD63P08962 238 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 RPS3P23396 243 aaKnown RBP eCLIP23.47■■□□□ 1.35
PTCH1-210ENST00000468211 NPY2RP49146 381 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 YBX1P67809 324 aaKnown RBP23.47■■□□□ 1.35
PTCH1-210ENST00000468211 UBE2Q2Q8WVN8 375 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 DLG3Q92796 817 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 ZNF285Q96NJ3 590 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 PANX3Q96QZ0 392 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 CUTCQ9NTM9 273 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 TSR3Q9UJK0 312 aaKnown RBP23.47■■□□□ 1.35
PTCH1-210ENST00000468211 HEATR5BQ9P2D3 2071 aa23.47■■□□□ 1.35
PTCH1-210ENST00000468211 ALOX12BO75342 701 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 VAPBO95292 243 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 MED26O95402 600 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 ONECUT2O95948 504 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 FGGP02679 453 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 ARSFP54793 590 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 EIF2S3LQ2VIR3 472 aaKnown RBP23.46■■□□□ 1.35
PTCH1-210ENST00000468211 CNSTQ6PJW8 725 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 OTOAQ7RTW8 1153 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 OVCH1Q7RTY7 1134 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 MPP5Q8N3R9 675 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 METTL27Q8N6F8 245 aaPredicted RBP23.46■■□□□ 1.35
PTCH1-210ENST00000468211 SKA2Q8WVK7 121 aaPredicted RBP23.46■■□□□ 1.35
PTCH1-210ENST00000468211 INPP5DQ92835 1189 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 RAD51AP1Q96B01 352 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 FAM136AQ96C01 138 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 KIFC1Q9BW19 673 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 LZTFL1Q9NQ48 299 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 BFARQ9NZS9 450 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 MAP10Q9P2G4 905 aa23.46■■□□□ 1.35
PTCH1-210ENST00000468211 A0A1W2PPV9 198 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 AGPSO00116 658 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 DSCR3O14972 297 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 NIPSNAP2O75323 286 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 FMO4P31512 558 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 TERF1P54274 439 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 SOX8P57073 446 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 NKG7Q16617 165 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 CYP2A13Q16696 494 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 ZC3H12BQ5HYM0 836 aaKnown RBP23.45■■□□□ 1.34
PTCH1-210ENST00000468211 FRMPD2BQ6IN97 320 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 IGFL3Q6UXB1 125 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 SHISA6Q6ZSJ9 500 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 GSTA5Q7RTV2 222 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 LRRC6Q86X45 466 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 OTUD6BQ8N6M0 293 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 LPGAT1Q92604 370 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 FKBP10Q96AY3 582 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 SNRNP40Q96DI7 357 aaKnown RBP23.45■■□□□ 1.34
PTCH1-210ENST00000468211 SPSB2Q99619 263 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 MIPEPQ99797 713 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 ENAMQ9NRM1 1142 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 INTS7Q9NVH2 962 aaKnown RBP23.45■■□□□ 1.34
PTCH1-210ENST00000468211 GALPQ9UBC7 116 aa23.45■■□□□ 1.34
PTCH1-210ENST00000468211 OR1D4P47884 311 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 VSX2P58304 361 aaPredicted RBP23.44■■□□□ 1.34
PTCH1-210ENST00000468211 FASTKQ14296 549 aaKnown RBP23.44■■□□□ 1.34
PTCH1-210ENST00000468211 LRRC8BQ6P9F7 803 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 TTC23LQ6PF05 361 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 SPNS2Q8IVW8 549 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 CISD2Q8N5K1 135 aaKnown RBP23.44■■□□□ 1.34
PTCH1-210ENST00000468211 OR2A1Q8NGT9 310 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms