RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SYTL1Q8IYJ3 562 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 PDIK1LQ8N165 341 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 RAB42Q8N4Z0 105 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 ZNF655Q8N720 491 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 C2CD4AQ8NCU7 369 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 PPFIBP2Q8ND30 876 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 OR9A1PQ8NGU1 263 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 MAGEC3Q8TD91 643 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 INPP5DQ92835 1189 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 SNF8Q96H20 258 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 LRFN5Q96NI6 719 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 PKP4Q99569 1192 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 WDR83Q9BRX9 315 aaKnown RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 AARSD1Q9BTE6 412 aaKnown RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 ACAT2Q9BWD1 397 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 STARD5Q9NSY2 213 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 ABCF3Q9NUQ8 709 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 EURLQ9NYK6 297 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 DHCR7Q9UBM7 475 aaKnown RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 RNF14Q9UBS8 474 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 PLCL2Q9UPR0 1127 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 DHRS7Q9Y394 339 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 PCDHGA6Q9Y5G7 932 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 MRFAP1Q9Y605 127 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 AHCTF1Q8WYP5 2266 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 ATRXP46100 2492 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 A0A1W2PPV9 198 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 B8ZZF3 427 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 H3BMH7 237 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 NRP2O60462 931 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 VPS26AO75436 327 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 PSIP1O75475 530 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 TTC4O95801 387 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 AHSGP02765 367 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 MSL3P1P0C860 447 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 MCM3P25205 808 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 ATP5DP30049 168 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 RPL21P46778 160 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 PGGT1BP53609 377 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 ARL4CP56559 192 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 TIAL1Q01085 375 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 PDIA2Q13087 525 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 KCNAB2Q13303 367 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 RBM20Q5T481 1227 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 TEDDM1Q5T9Z0 273 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 MLIPQ5VWP3 458 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 TRMT10BQ6PF06 316 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 ZNF517Q6ZMY9 492 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 PIWIL4Q7Z3Z4 852 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 ENDOVQ8N8Q3 282 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 SPATA4Q8NEY3 305 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 OR2A1Q8NGT9 310 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 CD200R1Q8TD46 325 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 APOBEC4Q8WW27 367 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 KCNJ9Q92806 393 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 CERS2Q96G23 380 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 RAB11FIP5Q9BXF6 653 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 GPR87Q9BY21 358 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 DPH5Q9H2P9 285 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 ZNF71Q9NQZ8 489 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 GEMIN8Q9NWZ8 242 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 ZC3H7BQ9UGR2 993 aaKnown RBP11.1□□□□□ -0.63
CDHR3-205ENST00000468143 KCNMB2Q9Y691 235 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 IGSF10Q6WRI0 2623 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 NBEAQ8NFP9 2946 aa11.1□□□□□ -0.63
CDHR3-205ENST00000468143 PYCARD-AS1I3L0S3 204 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 TP73O15350 636 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 ZSCAN9O15535 394 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-205ENST00000468143 CATP04040 527 aaKnown RBP11.09□□□□□ -0.63
CDHR3-205ENST00000468143 CAPN1P07384 714 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 HBQ1P09105 142 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 MPC1LP0DKB6 136 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 AGXTP21549 392 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 ALAS2P22557 587 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 CDKN2DP55273 166 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 ETF1P62495 437 aaKnown RBP11.09□□□□□ -0.63
CDHR3-205ENST00000468143 IL10RAQ13651 578 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 SLC9A5Q14940 896 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 FASTKD3Q14CZ7 662 aaKnown RBP11.09□□□□□ -0.63
CDHR3-205ENST00000468143 HIF1AQ16665 826 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 CYP2A13Q16696 494 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 CRTC2Q53ET0 693 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-205ENST00000468143 PTRH1Q86Y79 214 aaKnown RBP11.09□□□□□ -0.63
CDHR3-205ENST00000468143 FBXO36Q8NEA4 188 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 OR2L3Q8NG85 312 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 HMGCLL1Q8TB92 370 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 EEF1AKMT1Q8WVE0 214 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 ASB11Q8WXH4 323 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 ABHD17AQ96GS6 310 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 NAT9Q9BTE0 207 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 CHRNA10Q9GZZ6 450 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 FAM114A2Q9NRY5 505 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 INTS7Q9NVH2 962 aaKnown RBP11.09□□□□□ -0.63
CDHR3-205ENST00000468143 SPATA7Q9P0W8 599 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 TRMT6Q9UJA5 497 aaKnown RBP11.09□□□□□ -0.63
CDHR3-205ENST00000468143 POLHQ9Y253 713 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 COMMD10Q9Y6G5 202 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 TEX264Q9Y6I9 313 aa11.09□□□□□ -0.63
CDHR3-205ENST00000468143 AP1M2Q9Y6Q5 423 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms